KEGG T06118: FO059

Tomitella fengzijianii: FO059_16075

Entry

FO059_16075       CDS       T06118

Name

(GenBank) pseudouridine synthase

K06177

tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]

Organism

toy Tomitella fengzijianii

Brite

KEGG Orthology (KO) [BR:toy00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:toy03009]
    FO059_16075
   03016 Transfer RNA biogenesis [BR:toy03016]
    FO059_16075
Enzymes [BR:toy01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     FO059_16075
    5.4.99.29  23S rRNA pseudouridine746 synthase
     FO059_16075
Ribosome biogenesis [BR:toy03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    FO059_16075
Transfer RNA biogenesis [BR:toy03016]
Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    FO059_16075

SSDB

Motif

Pfam:

PseudoU_synth_2

Other DBs

NCBI-ProteinID:

QDQ98561

UniProt:

A0A516X7B3

Position

3543962..3545041

AA seq 359 aa
MPIHSLLVNPVTPDPSRGAESTTARGGYAGIYPDEVPRRPRSQRRRPPLPVRDGTGPSRV
RMPPEIGRAPGAAAESAPPATIAAYLAARFPVDADRIAEKIAAGEVVDADGVPVTARTPF
EPGAEVFYYRDPPREDPVPFGLRVLHRDERLLVVDKPHFLASMPRGRHIAETALVRLRRS
TGIDAVAPAHRLDRLTAGVLVFTVDPGVRRAYQELFAAGEVRKTYEAVCAAPPSVPLPAV
LRSRIVKDRGVHRAYETPGAPNAETAVERAPGGEHVRVRVRPATGKTHQIRVHLASIGAP
IMWDPLYGTDPDPDPADGDDAARPDFSRPLQLLARSLEFTDPFTGARRRFVSERALELW

NT seq 1080 nt +upstreamnt +downstreamnt
atgcccattcactcactcttagtgaaccccgtcacgccggatccgtcaaggggcgccgag
tcgacgaccgcacgcggcgggtacgccggcatctaccctgacgaggtgccccgccgtccc
cgctcgcagcgccgcaggccgcccctgcccgtgcgcgacgggacgggccccagccgggtg
cggatgccgccggagatcggacgggcaccaggggccgccgccgagtccgccccacccgcc
acgatcgccgcatacctggcggcgcgcttccccgtcgacgccgatcggatcgcggagaag
atcgccgccggcgaggtggtcgacgccgacggcgtgccggtcaccgcccggacgccattt
gagccgggggccgaggtcttctactaccgcgacccaccgcgcgaagacccggtgcccttc
gggctgcgggtcctccaccgcgacgagcggctgctggtggtggacaagccgcatttcctg
gcgtcgatgccgcgcggccggcacatcgcggagacggcactggtgcggctgcggcgcagc
accgggatcgacgccgtggccccggcgcaccggctggaccggctcaccgccggggtgctc
gtgttcaccgtggatcccggcgtgcggcgcgcctaccaggagctcttcgcggccggagag
gtgcgcaagacctacgaggcggtgtgcgccgcgcccccgtccgtcccactgccggcggtg
ctgcgcagccggatcgtcaaagaccgcggcgtgcaccgcgcctatgagacgccgggcgcg
ccgaacgccgagaccgcggtggagcgcgcacccggcggggagcacgtccgcgtgcgggtg
cgccccgcgacggggaagacgcaccagatccgggtgcacctggcgtcgatcggcgcaccg
atcatgtgggacccgctgtacggcaccgatccggacccggatcccgccgacggcgatgac
gctgcgcggccggacttctcacgcccgttgcaactgctggcgcggtccctggagttcacc
gacccgttcaccggggcccggcggcggttcgtcagcgaacgcgcgctggagttgtggtag

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

Download RDF

DBGET integrated database retrieval system