KEGG   Treponema pallidum subsp. pallidum Nichols: TP_0221
Entry
TP_0221           CDS       T00016                                 
Name
(GenBank) D,D-carboxypeptidase, putative
  KO
K07260  zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
Organism
tpa  Treponema pallidum subsp. pallidum Nichols
Pathway
tpa00550  Peptidoglycan biosynthesis
tpa01100  Metabolic pathways
tpa01502  Vancomycin resistance
tpa02020  Two-component system
Brite
KEGG Orthology (KO) [BR:tpa00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    TP_0221
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    TP_0221
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    TP_0221
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:tpa01002]
    TP_0221
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:tpa01011]
    TP_0221
  09183 Protein families: signaling and cellular processes
   01504 Antimicrobial resistance genes [BR:tpa01504]
    TP_0221
Enzymes [BR:tpa01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.17  Metallocarboxypeptidases
    3.4.17.14  zinc D-Ala-D-Ala carboxypeptidase
     TP_0221
Peptidases and inhibitors [BR:tpa01002]
 Metallo peptidases
  Family M15: zinc D-Ala-D-Ala carboxypeptidase family
   TP_0221
Peptidoglycan biosynthesis and degradation proteins [BR:tpa01011]
 Peptidoglycan biosynthesis and degradation
  Carboxypeptidase
   TP_0221
Antimicrobial resistance genes [BR:tpa01504]
 Gene sets
  Vancomycin resistance modules
   Vancomycin resistance, D-Ala-D-Lac type [MD:M00651]
    TP_0221
SSDB
Motif
Pfam: VanY
Other DBs
NCBI-ProteinID: AAC65208
UniProt: O83250
Position
226177..226959
AA seq 260 aa
MARWNCVCVCRVRVSCSGKCGLAAGRGSGGSASCACCCEARGASCAPCTRLCAQGREFLQ
ELDAVLTTEGYLLRLVDKKHPLPETFVPKHLVPVREQWLFFSKGRSLLLTKIAYEALHQL
IQAAARDGVALSVGSAYRSFAYQKKLFSWYAQEHGMQEAMRFSAREGTSQHQLGTVVDFG
SITPAFARSDAGRWTQRNAHRFGWSLSFPPGYEQVTGYVWEPWHFRYVGVRACALQKKWF
EDIQQYMLGFIHEWKVNASS
NT seq 783 nt   +upstreamnt  +downstreamnt
gtggcgcgttggaactgcgtgtgcgtatgcagggtacgtgttagttgctctgggaaatgc
ggtctcgccgcagggcgtggatcgggtggatctgcatcgtgtgcgtgctgctgcgaagcg
cgcggcgcttcctgcgcgccttgtacgcgtttgtgtgcacaggggagggagtttttgcaa
gagctcgacgcggtacttaccacggaggggtatctgttgcgtttggttgacaagaaacat
cccctgccagaaacgttcgtgccgaagcatctggtgccggtgcgtgagcagtggctcttt
ttttcaaaggggaggtcgctccttttaactaagattgcgtacgaagcgttacatcagctg
attcaggcggctgcgcgtgacggggtggcactgtccgttggttctgcctatcgctctttt
gcgtatcagaaaaagttgttctcctggtatgcgcaggagcatggcatgcaggaggctatg
cgtttttccgcgcgagaaggaacaagtcagcaccagttggggacggtagtggatttcggt
tctatcacgccggcgtttgcacggagtgatgcagggaggtggacgcagcgcaacgcccat
cgttttggatggtcgctgtcttttccccctggttacgagcaggtgacggggtatgtatgg
gagccgtggcatttccgttatgtaggggtgcgtgcgtgcgcactccaaaagaagtggttt
gaggatatccagcaatacatgcttggatttattcatgaatggaaggtgaacgcatcgtcg
tga

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (44)   

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