KEGG   Treponema pallidum Fribourg-Blanc: TPFB_0701
Entry
TPFB_0701         CDS       T02651                                 
Symbol
rpoZ
Name
(GenBank) putative DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
tpb  Treponema pallidum Fribourg-Blanc
Pathway
tpb03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:tpb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    TPFB_0701 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tpb03021]
    TPFB_0701 (rpoZ)
   03400 DNA repair and recombination proteins [BR:tpb03400]
    TPFB_0701 (rpoZ)
Enzymes [BR:tpb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     TPFB_0701 (rpoZ)
Transcription machinery [BR:tpb03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     TPFB_0701 (rpoZ)
DNA repair and recombination proteins [BR:tpb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      TPFB_0701 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AGK84347
Position
complement(769699..769902)
AA seq 67 aa
MIFPMQQLIEFQGNIYEITCAATRRAFQLAAVCDPVLDELGGKVVSAAAQQVFSGTVDYR
IEPQELG
NT seq 204 nt   +upstreamnt  +downstreamnt
atgattttcccaatgcagcagttgattgagtttcagggcaatatttatgagattacgtgt
gcagcaacgcgtcgagcttttcaactcgcagcggtttgcgaccctgttttggatgaactt
gggggaaaggtggtgtccgctgcagcgcagcaggtgttttcaggaacggtggactaccgg
atagagccgcaggagttagggtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system