KEGG   Thermofilum pendens: Tpen_0311
Entry
Tpen_0311         CDS       T00446                                 
Name
(GenBank) tRNA splicing endonuclease
  KO
K01170  tRNA-intron endonuclease, archaea type [EC:4.6.1.16]
Organism
tpe  Thermofilum pendens
Brite
KEGG Orthology (KO) [BR:tpe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tpe03016]
    Tpen_0311
Enzymes [BR:tpe01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.16  tRNA-intron lyase
     Tpen_0311
Transfer RNA biogenesis [BR:tpe03016]
 Prokaryotic type
  tRNA spricing factors
   tRNA splicing endonucleases
    Tpen_0311
SSDB
Motif
Pfam: tRNA_int_endo_N tRNA_int_endo Sen15
Other DBs
NCBI-ProteinID: ABL77720
UniProt: A1RWZ0
Position
complement(277524..278105)
AA seq 193 aa
MEKGQEVAKISGEGVFDGRIVRVLDKEFAEQLYQRGYGMLSGEILELTLVEAAYLVYREM
LKVKDDQGRTLSFPEIVRLASNFDPDFWVKLNVYTDLRNRALPAKPGVNPYEFLVDWKKK
GKPRRLLVRILREGTRVSFPEFEDMFRRALESDRELVIAIVDKEGVVTYYTVEGGSYEQV
GASVEDNFEVPSE
NT seq 582 nt   +upstreamnt  +downstreamnt
gtggagaagggtcaggaggtcgcgaagattagcggggagggggtgttcgacgggaggatc
gtcagggtgctcgacaaagagttcgcggagcaactgtaccagcgtggctacggtatgcta
agcggggagatcttagagcttacactagtagaggcagcgtacctcgtttaccgcgagatg
ttgaaggttaaagacgaccaaggaaggactttatcgtttccagagatcgttaggctggcg
tcgaattttgacccggacttctgggttaagctgaacgtctacacggatttgagaaacagg
gctctcccagcgaagccgggagtaaacccctacgagttcctggtggattggaagaagaag
gggaagccgaggaggctcctagtgaggatccttagggaggggactcgtgtgagcttcccg
gagttcgaggacatgtttcgcagggctttagagagcgatagggagttggtgatcgccatt
gtagataaggagggtgtggttacctattacacggtggagggtggtagctacgagcaagtc
ggggcaagcgttgaagataacttcgaggtaccttctgagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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