KEGG   Thermofilum pendens: Tpen_0710
Entry
Tpen_0710         CDS       T00446                                 
Name
(GenBank) Transcription factor IIE (TFIIE), alpha subunit
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
tpe  Thermofilum pendens
Pathway
tpe03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:tpe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Tpen_0710
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tpe03021]
    Tpen_0710
Transcription machinery [BR:tpe03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     Tpen_0710
 Prokaryotic type
  Archaeal type
    TFE
     Tpen_0710
SSDB
Motif
Pfam: TFIIE_alpha TF_Zn_Ribbon zf_UBZ HTH_9 DUF6758 zinc_ribbon_4 HypA Lar_restr_allev HVO_2753_ZBP DZR zinc_ribbon_15 Zn_ribbon_SprT Rrf2 HTH_5 zf-HIT IBR ADK_lid OrfB_Zn_ribbon Zn_Tnp_IS1595 Ribosomal_S27e zinc-ribbons_6 Sigma70_r3 zf-C2H2_3 zf-TFIIB
Other DBs
NCBI-ProteinID: ABL78112
UniProt: A1RY32
Position
660043..660579
AA seq 178 aa
MNAHEALAEIAGKMFGDNAKKVMMVLASNVEVSDEDLAKDLKMDPPELRKLLNDLFEARL
VKYRRARDENIGWYKYYWRITDEPIQQILSDRKRLTLSILEKVLSLEENSETYVCPKCGT
RYTVDEAENNNYTCEVCGEVLEPFDNTHRVEKLKRAIELLGNWDPSPKQQASRAIPHA
NT seq 537 nt   +upstreamnt  +downstreamnt
atgaatgcacacgaagccttggcagagattgccggaaagatgttcggggataatgccaag
aaggtgatgatggttctcgccagtaacgttgaggtctccgacgaagacctggcgaaggac
ctgaaaatggatccgcccgagcttaggaagttgctcaatgatctcttcgaagcgaggctc
gttaagtaccggagagcgcgcgacgagaacataggttggtacaagtactactggcgtata
accgatgagccgatccagcaaatactcagtgataggaagaggcttacgctaagtattcta
gaaaaagtgctttcgctggaggagaactccgagacatacgtatgccctaagtgcggcaca
cggtacactgtggatgaggcggagaacaacaactacacgtgcgaggtatgcggcgaggtc
ctcgaacctttcgacaacacgcaccgagtcgagaaacttaagagggcgatcgaactacta
ggaaactgggacccctctccaaaacaacaagcatcgcgcgccatccctcatgcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (24)   
   Pfam (24)   
All databases (41)   

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