KEGG   Treponema pedis: TPE_0028
Entry
TPE_0028          CDS       T02803                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
tped  Treponema pedis
Pathway
tped03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:tped00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    TPE_0028
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tped03021]
    TPE_0028
   03400 DNA repair and recombination proteins [BR:tped03400]
    TPE_0028
Enzymes [BR:tped01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     TPE_0028
Transcription machinery [BR:tped03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     TPE_0028
DNA repair and recombination proteins [BR:tped03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      TPE_0028
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AGT42531
UniProt: S6A2C0
Position
complement(29258..29464)
AA seq 68 aa
MIFPLKELIEFDDNIYEITCASTRRAYQLAKIQEPDSERSSDKMVSLGAKQIFTGEVNYQ
VEYHPDHN
NT seq 207 nt   +upstreamnt  +downstreamnt
atgatttttccattaaaagaactaatcgaatttgatgataatatttacgaaattacctgt
gcttctacaagaagagcatatcagcttgcaaaaatccaagagccggattccgagagaagc
agcgataagatggtatctttgggcgcaaagcagattttcacaggagaagttaattatcag
gttgaatatcacccggaccataattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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