KEGG   Thermococcus peptonophilus: A0127_07295
Entry
A0127_07295       CDS       T04728                                 
Name
(GenBank) radical SAM protein
  KO
K07739  elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311]
Organism
tpep  Thermococcus peptonophilus
Brite
KEGG Orthology (KO) [BR:tpep00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tpep03016]
    A0127_07295
Enzymes [BR:tpep01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.1  Transferring groups other than aminoacyl groups
    2.3.1.311  tRNA carboxymethyluridine synthase
     A0127_07295
Transfer RNA biogenesis [BR:tpep03016]
 Eukaryotic type
  tRNA modification factors
   Elongator complex
    A0127_07295
SSDB
Motif
Pfam: Radical_SAM_C Radical_SAM Acetyltransf_1 Acetyltransf_10 Acetyltransf_7
Other DBs
NCBI-ProteinID: AMQ19543
UniProt: A0A142CXP1
Position
complement(1370293..1372071)
AA seq 592 aa
MEDGERFRKAVEEIARAVLAGEIKDRNELNRYKIIVSRKYHLSKIPGNSDILKAIPEEER
DRFRELLKRKPTRTISGVAVVAMMTKPFPCPHGRCIYCPGGPSVGSPQSYTGKEPSALRA
VQSAYHPYIIMMRRLKQLTDIGHNVDKVEVIIQGGTFPAVDLDYQEWYIKCAFKAMNDFP
YFKDIENLEEKLVRLIVKGDKSVFEEDPEFKRAWELTHRRPYYYIEDEQRKNEKAKVRMV
GLTIETRPDWAFERQIDRMLKLGTTRVELGVQTVFNFIHERTKRGHGVEEIIKATQLLRD
AGLKINYHIMPGLPGSNFERDLYTFRKIFEDPRFRPDMLKIYPTLVTADAPLYAWYKAGK
YRPYTTEEALELLVEAYKLFPKWVRVMRIQRDIPAKLIVAGVKHSNLGQLVFNELIKRGI
RPREIRFREVGHMMQKFGIQPEIEHIKLLREDYDAAGGKEIFLSFEDVKNDILIGFLRLR
IPSEKAHRKEINCCPSAIVRELHVYGPLVPIGGKPKYEWQHRGYGRELLAEAERIAREEF
DVKKMLVISGVGVREYYRKFGYRKNGPYVAKRLDKSYAEYKKSREFDAHLNT
NT seq 1779 nt   +upstreamnt  +downstreamnt
atggaagacggtgagagattcaggaaagccgtcgaggagatagcgagagctgtgttagca
ggcgagataaaggatagaaacgagctcaaccgctacaagattatcgtgtcgcggaagtat
cacctttcaaagatcccgggcaactcggacattctgaaggccattcctgaggaggagcgc
gacagatttagagagctccttaagagaaagccgacgaggacaataagcggagttgccgtc
gtagccatgatgacaaagcccttcccctgcccgcacggcaggtgtatttactgcccggga
gggccctcagttggttcgccgcagagctacaccggaaaagagccttcagcgctgagggca
gtccagagcgcctaccacccatacatcatcatgatgcgcaggttaaagcagctcaccgac
atcggccacaacgttgataaggtggaggtcataatccagggagggacctttccagcggtt
gacctcgactaccaggaatggtacataaagtgcgccttcaaggcaatgaacgactttccg
tacttcaaggacattgaaaaccttgaggagaagctcgtcaggctcatagtgaagggcgac
aagtcggttttcgaagaagaccccgagttcaagagggcttgggagctgacccacagaagg
ccctactactacatcgaagacgagcagaggaaaaacgagaaggctaaggtcagaatggtc
ggccttactatagagacccgtcccgactgggccttcgagaggcagatagacagaatgctc
aaactgggaacgacgcgggtcgagcttggagttcagactgttttcaacttcatccacgag
aggacgaagagaggtcacggcgttgaggagataatcaaggccacccagcttctgagagac
gctggcttaaagataaactaccacataatgcctggcctgccggggagtaactttgagagg
gatctgtacaccttcaggaagatattcgaagatccccgcttccgccctgacatgctgaag
atatacccaaccctcgttactgccgacgctccgctctacgcctggtacaaggctggcaag
tacaggccgtacacgacggaagaggcccttgagctcctcgttgaagcctacaagctcttc
cccaagtgggttcgtgtgatgagaatacagagggacatccctgccaagctcatcgttgcc
ggagtcaagcactccaacctcggccagctcgtcttcaacgagctgataaagaggggaata
aggccgagggaaatccgctttagggaagtcggccatatgatgcagaagttcggaatccag
ccggagattgagcacataaaactcctccgcgaggactacgatgccgctggagggaaggag
atattcctgagtttcgaggacgttaagaacgacatcctgataggcttcctgaggcttagg
attccaagcgaaaaggcccacaggaaggagataaactgctgtccttctgccatagtgagg
gagcttcacgtctacggtcctctcgtgccaataggtggaaaaccgaagtacgagtggcag
catcgcgggtatgggagggagcttttagccgaggccgagaggatagcgagggaggagttc
gatgtcaagaaaatgctggtcatcagcggcgttggtgtaagggagtactacagaaagttc
ggctaccgcaagaacggaccatacgtggcgaagaggcttgacaagagctacgcggagtac
aaaaagagcagggagtttgacgcacatctgaacacatga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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