KEGG   Tetrapisispora phaffii: TPHA_0B03040
Entry
TPHA_0B03040      CDS       T02235                                 
Symbol
TPHA0B03040
Name
(RefSeq) hypothetical protein
  KO
K03257  translation initiation factor 4A
Organism
tpf  Tetrapisispora phaffii
Brite
KEGG Orthology (KO) [BR:tpf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tpf03019]
    TPHA_0B03040 (TPHA0B03040)
   03012 Translation factors [BR:tpf03012]
    TPHA_0B03040 (TPHA0B03040)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tpf04147]
    TPHA_0B03040 (TPHA0B03040)
Messenger RNA biogenesis [BR:tpf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     TPHA_0B03040 (TPHA0B03040)
   mRNA cycle factors
    Stress granule specific factors
     TPHA_0B03040 (TPHA0B03040)
Translation factors [BR:tpf03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    TPHA_0B03040 (TPHA0B03040)
Exosome [BR:tpf04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   TPHA_0B03040 (TPHA0B03040)
  Exosomal proteins of bladder cancer cells
   TPHA_0B03040 (TPHA0B03040)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 Helicase_C_2 AAA_30
Other DBs
NCBI-GeneID: 11535114
NCBI-ProteinID: XP_003684410
UniProt: G8BPP5
Position
2:complement(690810..692000)
AA seq 396 aa
MSAEGISEVEENQIQTNYDKVVYNFDDMNLKEELLKGVYGYGFEEPSAIQQRAILPIVEK
HDVLAQAQSGTGKTGTFSIAALERIDSSIKSPQALILAPTRELALQIQKVVIALALHMDV
KVHACIGGTSFVEDSEGLRDAQIVVGTPGRVSDNIQRRRFKTDNIKMFILDEADEMLSSG
FREQIYQIFTMLPPTTQVVLLSATLPNDVLEVTTKFMRNPVRILVKKDELTLEGIKQFYI
NVEEDDYKFDCLTDLYDSISVTQAVIFCNTRRKVEELTQKLTENNFTVSSIYSDLPQQER
DVIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPTNKENYIHRIGRGGRFGRKGV
AINFVTNQDVGAMRELEQFYSTQIEELPADVAEMFA
NT seq 1191 nt   +upstreamnt  +downstreamnt
atgtctgctgaaggtatttctgaagttgaagaaaatcaaatccaaaccaactatgacaaa
gttgtctacaatttcgatgacatgaacttgaaagaggaattgttaaagggtgtttacggt
tatggttttgaagaaccatctgctattcaacaacgtgctatcttaccaattgttgaaaaa
cacgatgtcttagctcaagctcaatctggtactggtaagactggtactttctccattgct
gctttagaaagaatcgacagttctattaaatccccacaagctttgatcttagctccaacc
agagaattagctttacaaattcaaaaggttgttattgctttagctttacacatggacgtc
aaagttcacgcttgtatcggtggtacttctttcgttgaagatagtgagggtttaagagat
gctcaaattgttgttggtaccccaggtcgtgtttctgacaacatccaaagaagaagattc
aagactgacaatatcaagatgttcatcttagatgaagccgatgaaatgttatcttctggt
ttcagagaacaaatttaccaaattttcaccatgttaccaccaaccacccaagttgtctta
ttatctgctactttaccaaatgatgtcttagaagttaccactaaattcatgagaaaccca
gttagaatcttagtcaagaaggatgaattaactttagaaggtattaaacaattctacatt
aacgtcgaagaagacgactacaaatttgactgtttgaccgatttatacgattctatctct
gtcacccaagctgttattttctgtaacaccagaagaaaggtcgaagaattaactcagaaa
ttaaccgaaaacaacttcactgtttcctccatttactctgacttaccacaacaggaaaga
gatgtcatcatgaaggaattcagatctggttcttccagaattttaatctctacagattta
ttagctagaggtattgatgttcaacaagtctccttggttattaactacgatttaccaacc
aacaaagaaaactatattcacagaattggtagaggtggtcgtttcggtagaaagggtgtt
gctatcaacttcgtcactaaccaagatgtcggtgctatgagagaattagaacaattctac
tccactcaaatcgaagaattaccagctgatgtcgctgaaatgttcgcttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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