KEGG   Tetrapisispora phaffii: TPHA_0F02190
Entry
TPHA_0F02190      CDS       T02235                                 
Symbol
TPHA0F02190
Name
(RefSeq) hypothetical protein
  KO
K14536  ribosome assembly protein 1 [EC:3.6.5.-]
Organism
tpf  Tetrapisispora phaffii
Pathway
tpf03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:tpf00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    TPHA_0F02190 (TPHA0F02190)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tpf03009]
    TPHA_0F02190 (TPHA0F02190)
Ribosome biogenesis [BR:tpf03009]
 Eukaryotic type
  Pre-60S particles
   GTPases
    TPHA_0F02190 (TPHA0F02190)
SSDB
Motif
Pfam: GTP_EFTU EFG_C EFG_III GTP_EFTU_D2 EFG_IV MMR_HSR1 SLS1_N
Other DBs
NCBI-GeneID: 11535466
NCBI-ProteinID: XP_003686135
UniProt: G8BVB9
Position
6:482660..486016
AA seq 1118 aa
MVKISPDTFKRLQNDPSCIRNICIVAHVDHGKTSLSDSLLASNGIISQRLAGKVRFLDSR
PDEQLRGITMESSAISLYFRVLHKQENSDKPLVNEHLINLIDSPGHIDFSSEVSAASRLC
DGAVVLVDVVEGVCSQTITVLRQCWTEKLKPVLVLNKIDRLITELQLSSQEAYLHLTKVI
EQVNSVLGSFFIGQQQLDDFSWKEQLEDDANTAFKDSDDSELYFDPAKNNVVFASAVDGW
GFNIGQLAKFYEVKLGAKRENLQKVLWGDFYMDPNEKILNNKTLKGRSLKPLFVSLILDN
IWKVYENTVIERNMEVVEKITKALNITLQSRDLMSKDDKILLRTILGQWLPVSTAILITV
IEKLPSPLLSQEDRLDTILGANIDQEEVDATLLEGMKKCDRNGPSIAYVSKILSIPREEL
PMKASDNSPEAILERGRRAREMAMRAAKRAELLEKTSNLHISDSDNTLKIKDSDLYERAV
ETATTPSTDEIQKTVTGQKKTANDSFSIVTEAAPALDLGFEYEEENVEHENENSEDDFVP
DFEPPVIDPNDPLASMFEYEEEEDPFEISENNEINVALEEEDEEEDLFDEVDEVLVGFAR
IYSGSLRVGQSISVLGPKYNPKCPTEHIHSAEITDLYLFMGKELVPLDVCPAGNIVGVGG
LAGKLLKNGTLVDNSIPGINLAGVNLQIQPIVKVAVEPKNPMQLNKLVRGLKLLELADPC
VQTYLESSGEHILCTAGELHLERCIKDLQERFAGIEIACSEPAIPYRETFISDSNTNPVK
NANFERGTVEKAIGPYKLRLRSVPMNNDAVKYIENNADIIKDFLTTDYIQNHEGETKLTK
QDFITKLKSILKSGNSEIDIWDNLESEIVLFGPKRIGNNILMSKNNLLNSPFLITDGAFE
FSDSVINGFQNSVNEGPLANEVVQGMCVIIEDIYKMSDEEIASIEDPTYQKENVDLSGRL
INVTRDTIHTSFLDWSARLMWAMYSCDIQTSVEVLGKVYAVVQQRRGKIVSEELKEGTPF
FQIEAHIPVVNAFGFSEDIRKKTSGAAQPQLVFLGYESIDIDPFWVPTTEKELEELGDTA
DKENLARKHMIQIRKRKGLFVDEKVITNAEKQRTLKRN
NT seq 3357 nt   +upstreamnt  +downstreamnt
atggtgaagattagtccagatactttcaagagattgcagaatgacccctcttgtattaga
aatatttgtatagtggcgcacgttgatcatggtaaaacatctttatcagattcattacta
gcatcaaatggtattatatcgcaaagattagcaggtaaagtccgttttctggactcaagg
ccagatgaacaacttcgtggtattacaatggaatcttctgcgatttcgttatattttaga
gtcttacataaacaagaaaattcagataagccactggttaatgaacatttgataaatctt
atagattcaccaggtcatattgatttttcgagtgaagtaagtgcagcttctagattatgt
gatggtgctgttgtattagttgatgtagtcgaaggtgtttgctcacaaactatcactgtc
ttgagacaatgttggactgaaaaactaaaacctgttttagttctaaataaaatcgataga
ttaattactgaattacaactttcatcccaagaagcttacttgcatctgactaaagttata
gaacaagtaaattccgtcctgggttctttctttattggacaacaacaattagatgacttt
tcttggaaagaacagttagaggatgatgcaaacactgcatttaaagattcagatgactca
gaattatatttcgatcctgccaaaaataatgtcgtttttgcttcagcagtagatggttgg
ggttttaatattggtcaattagctaaattctatgaagtaaaattaggtgcaaaaagagaa
aatcttcaaaaggtgttatggggtgatttttacatggacccaaacgaaaaaattttaaac
aataagacccttaaaggtagatctttaaaaccactgttcgtttccttaattttagataac
atttggaaggtttatgaaaatacagtaatcgaaagaaacatggaagttgttgaaaagata
acaaaagcattaaatattactcttcaaagccgtgatttaatgtcaaaagatgacaaaata
ttattgagaactattctaggccaatggttacccgttagtacagccatattaattactgtt
atcgaaaagttaccatctccattactttcacaagaggacagattggataccattttaggt
gccaatatagaccaagaagaagttgatgccactttgttggaagggatgaaaaagtgtgat
agaaatggaccttcaattgcctatgtgtcaaagattttatctattccaagagaagaactt
ccaatgaaggcatctgacaattctcctgaggctatattagagcgtggtagaagagcacgt
gaaatggccatgagagcagccaagcgtgcagaattgttagagaaaacttcaaatttacat
atttctgactcagacaataccttaaaaattaaagattcagatttatatgaaagagcagtt
gaaactgcaactacgccatctacagatgaaatacaaaagactgtaactggtcaaaagaaa
acagcgaatgatagtttttcaattgttactgaagctgcccccgcattagacttaggtttt
gaatatgaagaggagaatgtcgagcacgaaaatgaaaatagtgaagatgattttgtacca
gattttgagcctcctgtaatagacccaaatgatccactagcatctatgtttgagtatgaa
gaagaagaagatccttttgaaataagtgagaataacgagattaatgttgcactcgaagaa
gaggatgaagaagaggatttgttcgacgaagttgatgaagttttggtaggttttgccaga
atttacagcggttcgttaagagtaggacaatcaatatccgttttaggacctaaatataat
cctaaatgccctactgaacatattcactcggccgaaataactgatttatatttgtttatg
ggtaaggaattagtacctttagatgtatgtcctgctggtaatattgtaggtgttggtgga
ttggcaggaaaacttttaaaaaatggtacattagttgataatagtattcctggtattaat
ttagctggtgttaaccttcaaatacaaccaattgtcaaggttgctgtagaacctaaaaat
ccaatgcaattaaataaattagttcgtggtttaaaattactagaattggctgatccatgc
gttcagacgtatcttgaaagttcaggtgaacacattctgtgtacggctggtgaattgcat
ttagagagatgtataaaggatttacaagaaagatttgctggaattgaaatagcttgttca
gaaccggctattccatacagagagacatttatttccgatagcaacacgaatccagtaaaa
aatgctaattttgagagaggaactgttgaaaaagccattggaccctacaaacttagatta
cgcagtgttccaatgaacaatgatgctgttaaatatattgagaataatgctgatattata
aaagactttttgacaactgattatattcaaaatcatgaaggtgaaacgaaactgacgaag
caagattttattactaagttgaaatcaattctaaagtctggaaattcagagattgacatt
tgggataatctggaatcagaaattgttttatttggtccaaagagaattggtaataatatt
ttgatgtcgaagaacaatttattaaatagtccatttttgataactgatggggcttttgaa
ttttctgattcagttatcaacggattccaaaattctgtgaatgaaggcccattagccaat
gaagttgttcaaggtatgtgtgtgattatagaagatatatataaaatgtctgatgaagaa
attgcatcgattgaggacccaacataccaaaaggaaaatgtagatttatcggggagattg
attaacgttacaagagatacaattcacactagtttcttagattggtctgcaagactaatg
tgggctatgtactcatgtgatatccaaacatctgtcgaagtattgggtaaagtttacgca
gttgttcaacagagacgtggtaaaatcgtttctgaagaattaaaagaaggtactccattt
ttccaaatcgaggcccatattccagttgttaacgcctttggttttagtgaagatatccgt
aaaaagacatctggtgcagcacaaccgcaattagtttttctaggatatgaatcaattgat
attgatccattctgggtgcctacaacggagaaagaattagaggaattgggtgatacagct
gacaaagaaaatcttgcccgtaagcatatgatccaaattagaaaaagaaaaggtttgttt
gttgatgagaaggttattactaatgccgagaaacaacgtactttaaagcgtaattag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system