KEGG   Tetrapisispora phaffii: TPHA_0H01140
Entry
TPHA_0H01140      CDS       T02235                                 
Symbol
TPHA0H01140
Name
(RefSeq) hypothetical protein
  KO
K13126  polyadenylate-binding protein
Organism
tpf  Tetrapisispora phaffii
Pathway
tpf03015  mRNA surveillance pathway
tpf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tpf00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    TPHA_0H01140 (TPHA0H01140)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TPHA_0H01140 (TPHA0H01140)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tpf03019]
    TPHA_0H01140 (TPHA0H01140)
   03041 Spliceosome [BR:tpf03041]
    TPHA_0H01140 (TPHA0H01140)
Messenger RNA biogenesis [BR:tpf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     TPHA_0H01140 (TPHA0H01140)
   mRNA cycle factors
    Stress granule specific factors
     TPHA_0H01140 (TPHA0H01140)
Spliceosome [BR:tpf03041]
 Complex C
  Other components
   Complex C specific factors
    TPHA_0H01140 (TPHA0H01140)
SSDB
Motif
Pfam: RRM_1 CT47
Other DBs
NCBI-GeneID: 11533994
NCBI-ProteinID: XP_003686756
UniProt: G8BX18
Position
8:complement(251773..254277)
AA seq 834 aa
MSSSNNSSDNNNILINSELEQLANINQLTIRIGWLALDNSFLYDLEKLIFDNKGNIIPLL
SIENYEFLNDEQRLRILKENSDIFLFEKGLKEIENSFAKSLKINQDEEDGDEGCVKEEEE
EEEEEDWEYDYVVQSHFKNLNNLNAVVGIVTGLLKENKNISKWSISSNEHALSHPGNLYI
KGIPKEMTIDDILPVFLNFGKVISLKIKTDQSGNSLGYGFLSFQLGSQASLCKNELNGTN
LNGSKLFINYHVERKERERIYWDNLRERNFNDKKFKGIFIGNLPIYDEDKNLVSPEKVFE
KFCMVLKDVTPIDSIVSYYFPKENSNSNIDYGDDDNADTEQPKGKINVETCPLQNEEIPL
KGYGFIKFISHDHALAAVEILKDFQWLGNKIIVNKAIQSRPHHTSFNGSPPNVNNNNLAY
GYDNDVNDNYYGDNIPISLSSSSLSSANNKTNSTKNKNGNGMKYYHPGKKQINNAIPNYY
NYNPHPTTGMFQRNFQTSPYVQYIPYSPVNSFDSSESDIYNLSSSPRAVSRSSITATSPE
NVNDLFENHEYSYNANPSTVANLNHGSSFNRNTFHYNYNYSPFYNHNGNYKFVSGGSKNV
LFPRPLNDQQESNLYIKHIPLSWSDSDLYDFYKVFGEVISAKIITVGGSKNKVTKSERTD
LEIPVGSSKGYGFVYFKNTLDASKAIIETNRYKIDKDHILHVSFAQKRSKLSDYEDCVSS
NIDKKNFTKVANGPNPKSNRAIFVDYSNLEYSDQRFMYNNVMNQSMHPMNIYQIGASNYI
PQMNNWNFHMMPSPLHGGMPAHNFGQRMSVPYIIRAPVSAASDFDVGNSKYSRD
NT seq 2505 nt   +upstreamnt  +downstreamnt
atgtcttcatcaaataacagtagtgataataacaatattttgataaattcagaactagaa
caattagcaaatataaatcaattgaccataaggattggatggttggctctagataattca
tttttatatgatttagaaaaattaatattcgataataaaggtaatatcatacctttatta
tctattgaaaattatgaatttttaaatgatgagcaaagattaagaattttaaaagaaaat
agtgacattttcttatttgaaaaaggtttaaaagaaattgaaaattcattcgccaagtct
ttgaaaattaatcaagatgaagaggatggggatgaaggatgtgtaaaggaggaggaggag
gaggaggaagaggaagattgggaatatgattacgttgttcaatcacattttaaaaatttg
aataatttaaatgctgtcgtcggaatcgtcacagggttgttaaaggaaaataaaaatata
agtaaatggtcgatctcttcaaatgaacatgctctgtcacatccgggaaatttatatatc
aaaggtataccaaaagagatgaccatagatgatatattgccggtttttttgaattttggg
aaggtaatatctttgaaaattaaaacagatcaatcaggtaattcattaggttatggtttt
ttgtcgttccagttaggttcacaagcttcactatgtaaaaatgaattaaatggcactaat
ttgaatggttcaaaactttttattaattatcatgttgagagaaaggaaagagaaagaatt
tattgggataatttaagagaaagaaattttaatgataaaaaatttaaaggaatattcatt
ggtaatttaccaatttatgatgaagataagaatttagttagtcccgaaaaagtgttcgaa
aagttttgtatggtattaaaagatgtgacgcccattgattcaattgtatcgtattatttt
ccgaaagaaaacagtaactcaaatattgactatggagatgatgataatgcagatacagaa
caacctaagggaaagataaacgttgaaacctgtccattgcaaaatgaagaaattccatta
aaaggttatggttttataaaatttataagtcatgatcatgcattagctgctgtagaaatt
ttaaaagattttcaatggttaggaaataaaattattgttaataaagctatacaaagcaga
ccccaccatacttcatttaatggctcacctcctaatgttaacaataataatttagcatac
ggttatgataatgacgtaaatgataactactacggggataacatacctatttctttatca
tcatcttctttatcatctgctaataataagactaatagtactaaaaataaaaatggaaat
ggcatgaaatattatcatcctggcaagaagcagattaataatgccattccaaattactat
aattataatcctcatccaactacaggcatgtttcaaaggaatttccaaacaagtccgtat
gttcaatatattccttactctcctgtgaattcatttgatagctcagaatcagatatatat
aatttgtcatcatccccaagagcagtatctaggtcttctattacagctacatcgcctgaa
aatgtaaatgacttgtttgaaaaccacgagtactcatataatgctaatccttccactgtg
gcaaatttgaatcatggaagcagttttaacagaaacacatttcattataattacaattac
tctcctttttacaatcacaatggcaattataaatttgtcagtggaggaagcaaaaacgta
ttgttcccaagaccattaaatgatcagcaagaatcgaatttgtatattaaacatataccg
ttatcttggagcgactccgatttatatgatttctataaagtttttggtgaagtaatcagt
gccaaaataattacagtcggtggtagtaagaataaagttactaaatctgaacgtactgat
ttggaaattcctgttggatcttcaaaaggctatggatttgtctactttaagaatacttta
gatgcttcaaaagcaataatcgaaacaaacagatataaaatagataaggaccatattctt
catgtctcatttgcccaaaagaggtccaaattatcagattatgaagattgtgttagcagt
aatattgataaaaaaaattttactaaagttgcaaatgggcctaaccctaaaagtaataga
gcaatatttgttgactattcaaatttagagtattcggatcaaagattcatgtataataat
gttatgaatcaatccatgcatccaatgaatatttatcaaattggagcatctaattatatt
ccccagatgaacaattggaacttccatatgatgccgtcaccccttcatggtggaatgcca
gctcataactttggccaacgcatgagtgtgccttatataattcgtgcgccagtgtcagca
gcaagtgattttgatgttggaaattcaaaatatagtagagattag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (53)   
   KEGG ORTHOLOGY (1)   
   RefGene (49)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (64)   

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