KEGG   Tetrapisispora phaffii: TPHA_0J01230
Entry
TPHA_0J01230      CDS       T02235                                 
Symbol
TPHA0J01230
Name
(RefSeq) hypothetical protein
  KO
K18655  ATP-dependent RNA helicase DDX19/DBP5 [EC:3.6.4.13]
Organism
tpf  Tetrapisispora phaffii
Pathway
tpf03013  Nucleocytoplasmic transport
tpf03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tpf00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    TPHA_0J01230 (TPHA0J01230)
   03015 mRNA surveillance pathway
    TPHA_0J01230 (TPHA0J01230)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tpf03019]
    TPHA_0J01230 (TPHA0J01230)
Messenger RNA biogenesis [BR:tpf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     TPHA_0J01230 (TPHA0J01230)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_30 AAA_22 ChaB IMPa_N_2
Other DBs
NCBI-GeneID: 11533028
NCBI-ProteinID: XP_003687379
UniProt: G8BYK3
Position
10:complement(289735..291210)
AA seq 491 aa
MSEDKKDAASLLASLKIDADNNSSEDKNVKEIKEADNEPKVVAESKTIIEDKFAGKDADK
SGDDKKTKEETDSSLVKSEYEVTVKLADLQADPNSPLFSAKSFEELGLEPELLKGLYAMK
FQKPSKIQERALPLLLSNPPRNMIAQSQSGTGKTAAFSLTMLSRVDQTVELPQAICLAPA
RELARQTLEVIQEMGKFTKITSQLVVPDSYEKNKGINAQIIVGTPGTVLDLMRRKMLNVS
RVKVYVLDEADNMLDKQGLGDQCIRVKKFLPKTAQLVLFSATFDEAVREYAKKVVPSANT
VELQRNEVNVSAIKQLYMDCDNETHKYEVLTELYGLLTIGSSIIFVSTKKTANLLYGKLK
QEGHQVSILHGDLNSSDRDRLIDDFREGRSKVLITTNVLARGIDIPSVSMVVNYDLPTTL
NGEADPATYIHRIGRTGRFGRKGVAISFVYDKQSFRVLSNIKKYFGDIEMTRVPTDDWDE
VETIVKKVLKE
NT seq 1476 nt   +upstreamnt  +downstreamnt
atgtctgaggataagaaagacgcagccagcttactggcatcattaaaaattgatgctgac
aacaactcatctgaagataaaaatgtcaaagagataaaagaagctgataatgaaccaaag
gttgtagctgaatcaaagaccatcatagaagataaatttgccggtaaggatgctgataag
agcggagatgataagaaaaccaaggaagaaactgattctagtttggttaaatctgaatat
gaagtcactgtcaaattagctgatcttcaagctgatcctaattctccattgttcagtgcc
aaatcctttgaagaattaggtctggaaccagaattattaaaaggtttatatgcaatgaag
tttcaaaaaccatctaaaattcaagaaagagcattaccactactattaagcaatccacca
agaaatatgatagctcaatcccaatcgggtaccggtaaaacagcagctttttctttaacc
atgttgagtcgtgttgatcaaactgtagagttaccacaggctatatgtttagctcctgcc
agagaattggctagacaaacgttggaagttatccaagaaatgggtaaatttacaaaaatt
acttctcaattagttgtcccagattcttatgagaagaataaaggtatcaatgcacaaatt
attgttggtacccctggtacagttttagatttaatgcgtagaaaaatgttaaacgtcagc
cgtgttaaagtatacgttttagatgaagccgataacatgttggataagcaaggtttaggt
gatcaatgtattcgtgttaagaaatttttaccaaaaactgctcaattagtattattcagt
gctacttttgatgaagctgttagagaatatgccaaaaaggttgtaccatcggcaaacaca
gtagaattgcaaagaaatgaagttaatgtcagtgcaatcaaacaattatacatggattgt
gataatgaaactcacaaatatgaagtgttaacagagttatatggtttattgacaattggt
tcatcgatcatttttgtctctacgaagaaaactgctaatctattatacggtaaattaaaa
caggaaggtcatcaagtttctatattgcatggtgatttaaatagtagtgatagagataga
ttaattgatgatttcagagaaggaagatcgaaagtcctgatcactactaacgtattagct
cgtggcattgatattccatctgtttcgatggtagtcaattacgatttacctactaccttg
aatggtgaagcagacccagctacatatatccatagaatcggtagaacaggtagatttggt
agaaagggtgttgccatttcatttgtctatgacaaacaatcattccgtgtcttatccaac
atcaagaagtatttcggtgatatagaaatgactcgtgttccaactgatgattgggatgaa
gtcgaaactattgtaaagaaagtattgaaagaataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (20)   

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