KEGG   Treponema putidum: JO40_04865
Entry
JO40_04865        CDS       T03278                                 
Name
(GenBank) CRISPR-associated protein cas9/csn1, subtype II/nmemi
  KO
K09952  CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
Organism
tpk  Treponema putidum
Brite
KEGG Orthology (KO) [BR:tpk00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tpk02048]
    JO40_04865
Prokaryotic defense system [BR:tpk02048]
 CRISPR-Cas system
  Type II CRISPR-Cas system
   Type II signiture cas proteins
    JO40_04865
SSDB
Motif
Pfam: Cas9_REC Cas9_PI HNH_4 Cas9-BH HNH HNH_5 RRXRR Prp18 Endonuclease_7
Other DBs
NCBI-ProteinID: AIN93522
UniProt: A0A562S2Z1
Position
1030174..1034361
AA seq 1395 aa
MKKEIKDYFLGLDVGTGSVGWAVTDTDYKLLKANHKDLWGMRCFETAETAEKRRLFRGAR
RRIERRRKRIKLLQELFSQEIAKIDEDFFQRMEESPFYAEDKTILQENTLFNDRDFTDKT
YHKAYPTINHLIKAWIENKVKPDPRLLYLACHNIIKKRGHFLFEGDFDSENQFDTSVQAL
FEYLREDMELDIDADSKKIKEILKDSALKNSDKQNRLNKLLGLKSSDKQKKALTNLISGN
KANFADLYDNPDLKDAEKNSISFSKDDFDALSDELASVLGDSFELLLRAKAVYNCSVLSK
VIGDEQYLSFAKVKIYEKHKNDLTKLKEVVKKYFPIEYRNIFGYKQSENNNCNYSRYVGV
CKSGSKKKVINKTASQEDFYKFLKDILLKRSDVPEANGILTEIETGTFLPKQISKNNAEI
PYQLRKIELEKILTNAEKFFSFLKQKDENGLSHSEKIIMLLTFKIPYYIGPINTSHKQYF
PDRSWVIKKENAPQEKITPWNFFDHIDKEKTAEAFITSRTNFCTYLIGESVLPKNSLLYS
EYTVLNEINNLQIIIDGKNICDVKLKQKIYEELFKKYKKVTQKQISTFIKHEGICNKTDE
VIILGIDKECTSSLKSYIELKNIFGKQVDEISTKNMLEDIIRWATIYDEGEGKTILKTKI
KAEYEKYYSDEQIKKILNLKLSGWGRLSRKFLESITSEIPGFIEPVNIITAMRETQNNLM
ELLSSKFKFNENIKKINSGFEDTDKRFSYNSLVKPLFLSPSVKKMLWQTLKLVKEISHIT
QAPPKKIFIEMAKGAELEPARTKTRLKILQDLYNSCKNDADAFSSEIQYLLGKIENEDNL
RLRSDKLYLYYTQLGKCMYCGKPIEIGHVFDTSKYDIDHIYPQSKIKDDSINNRVLVCSS
CNKNKEDKYPLKPEIQLKQKKFWNFLQRNNFISIEKFNRLTRTTPISDDETAKFIARQLV
ETRQATKVAAKVLEKIFPETNIVYSKAETVSMFRNKFDIIKCREINDFHHAHDAYLNIVV
GNVYNTKFTNNPWNFIKEKRDNPKIGDTYNYYKVFDYDVKRNNITAWEKEKTIITVKTML
KRNTPIYTRQAACKKGELFNQTIMKKGLGQHPLKKECPFSNISKYGGYNKVSAAYYTFIE
YEEKGNKIRSLETIPLYLEKDIQKSQDGLKGYLTDQLGKKEIKILVPKIKINSLLKINGF
PCHITGKTGASFVLRPAVQFCCSNDEVLYFKKIIRFNEIRSQREKMGKTISPYEDLSFRS
YIKENLCKKTKNDEIGEKEFYGFLQKKNLEIYDMLLIKHKDTIYSKRPNSTTLDMLIKGR
YEFINLKPEDQIRVMLEILKLFCTTREVIDLGLIKGKSEAGVTTLGKKISNLDSCILIYQ
SITGIFEKRIDLLKI
NT seq 4188 nt   +upstreamnt  +downstreamnt
atgaaaaaagaaattaaggattattttctcggattggatgtaggaaccggatcggtgggt
tgggcagttactgatactgactataaactcttaaaggctaatcataaagacctttgggga
atgaggtgttttgagacggcggaaactgctgaaaaacgcaggctatttcggggggcgcgc
cgccgcattgaaaggaggagaaaaaggataaagctgcttcaagaacttttttcccaagaa
attgcaaaaatagatgaagattttttccaaagaatggaggaaagccctttctatgcagaa
gacaagactatattacaagaaaacactctttttaatgatagagattttaccgataaaaca
taccataaagcctatcctaccataaaccatctgataaaggcttggattgaaaacaaggta
aagccggatccacgattattatatttagcctgtcataatattataaaaaaacgaggacat
tttttatttgaaggtgactttgattctgaaaatcaatttgatacctctgtacaagctctt
tttgagtatctgcgtgaggatatggaactcgatattgatgccgatagcaaaaaaataaaa
gagattttaaaggatagcgctttaaaaaattccgataaacaaaatcggctaaataagctt
ttagggctgaaatcttccgacaagcaaaaaaaagctcttactaatttaatatccggtaac
aaggcaaactttgccgatctttatgataatcccgatttaaaggatgcagagaaaaatagc
atatctttttctaaagacgattttgatgctttaagcgatgaacttgcttccgttttagga
gattcttttgagcttttgttaagagcaaaggctgtatataattgctcggttctttccaaa
gtaataggagatgaacagtatctttcttttgcaaaggtaaaaatatatgaaaagcataaa
aatgatttgactaaactaaaagaagttgtaaaaaaatattttcctatagaatatcgaaat
atattcggatataaacaatctgaaaataataactgtaattattcaagatatgtaggtgtg
tgtaaaagcggaagtaaaaaaaaggttataaataaaactgcaagtcaagaagatttttat
aagtttttaaaagatattcttttaaaaagaagtgatgtgcctgaagcaaacggaatatta
acagaaattgaaacaggaacctttctgccgaaacaaatttccaaaaacaatgcagaaatt
ccttatcaattacgcaaaatagaattagaaaagatattaaccaatgcggaaaagtttttt
tcttttttaaaacaaaaagatgaaaacggtttatctcacagtgaaaagattataatgctt
ttaacatttaaaattccgtattatatagggcctataaatacttctcataaacagtatttt
cctgataggtcatgggtaataaaaaaagaaaatgctcctcaagagaagataactccatgg
aatttttttgatcatatcgataaggaaaaaacagctgaagcctttattacaagcagaacc
aatttttgcacatatttaataggagaatctgttttacctaaaaattctcttttatattcc
gaatatacagttttaaatgaaataaacaatttacagattattattgacggaaaaaatatc
tgcgatgttaaactaaaacaaaaaatatacgaagagttatttaaaaaatataaaaaagtt
acacaaaaacagatttcaacttttattaaacacgaaggtatttgtaataaaacggatgaa
gtaattattttaggtattgataaagaatgtacatcttctttaaaatcatacatagaactt
aaaaacatattcggaaaacaagtggatgaaatttcgacaaagaatatgcttgaagacatt
atacgatgggctactatctatgatgaaggagaaggtaaaacaatacttaaaacaaaaata
aaagccgaatatgaaaaatattattctgatgaacagatcaaaaaaattctaaatcttaaa
ctttcaggttggggtcgtctatcacgcaagtttcttgaatccattacatcagaaataccc
ggctttatcgaaccggtaaatataataacggcaatgcgtgaaactcaaaataatttaatg
gaattgctgagcagtaaatttaaatttaacgaaaacattaaaaaaataaattccggattt
gaggataccgataaacgattttcatataacagtttggtaaagcctttatttttatcgcca
tcggtaaaaaaaatgttgtggcagactcttaaacttgtaaaagaaatatcgcatattacc
caagctccgcctaaaaaaatattcatcgaaatggcaaagggtgcagaacttgagcctgca
cggacaaaaacaagactaaaaattttgcaggacttgtacaatagctgtaaaaatgatgcg
gatgcttttagttccgagatacaatatcttttaggtaaaatagaaaatgaagataattta
aggcttcgcagcgacaaactttatctttattacacacagcttggaaagtgtatgtattgc
ggtaaaccgattgaaatagggcatgtatttgacacaagcaaatatgatatagaccatatt
tatcctcaatctaagattaaagatgatagtataaataaccgagttttggtatgcagcagc
tgcaataagaataaggaggacaaatatcctttgaagcctgaaattcaattaaaacaaaaa
aaattttggaatttcttacaaagaaataactttataagtattgaaaaatttaaccgatta
acaagaacgactccaatctcggatgacgaaacggcaaaattcattgcccggcaacttgta
gaaacaagacaggcaacaaaggtagctgcaaaagtattagaaaaaatatttcctgaaaca
aatatcgtttactctaaggctgaaaccgtatcaatgtttagaaataaattcgatattata
aaatgcagagaaataaacgattttcatcatgcacatgacgcatatttaaatattgttgtc
ggaaatgtttataatactaaatttacaaataatccttggaattttataaaagaaaaaaga
gataatcctaaaattggcgatacgtacaattattataaggtttttgattatgatgtaaaa
agaaataatatcacagcatgggaaaaagaaaaaacaattattactgtgaagactatgctt
aaaaggaatacccctatttatacacgccaagctgcctgcaaaaagggagaactctttaat
caaaccattatgaaaaaaggattgggccaacatcctctaaaaaaagaatgtcctttttct
aatatttcaaaatatgggggctataataaagtttctgctgcatattatacttttatagaa
tatgaagaaaaaggaaataagatacgaagcttagaaactatccctctatatttggaaaag
gacattcaaaaaagtcaagatggattaaagggttacttaacagaccagctaggaaaaaaa
gaaattaagattttggttcccaaaataaaaatcaactcccttttaaaaattaacggcttc
ccttgccacataacaggaaaaacaggagcttcctttgttctaaggcctgctgttcaattt
tgctgttcaaatgatgaagttctttattttaaaaaaattataagattcaatgaaataaga
agtcaaagagagaagatgggaaaaacaatttctccttatgaagacttatcctttagatct
tatatcaaagaaaatttatgcaaaaagacaaaaaatgatgaaataggagaaaaggagttt
tatggctttcttcaaaagaagaatttagaaatctatgatatgcttttaataaaacataag
gatactatttatagtaaaaggccgaattctacaactcttgatatgttaatcaaaggaaga
tatgagtttataaatttaaagcctgaagatcaaattagagttatgctggaaattctaaaa
ttgttttgtactactagagaggtaatagatttaggattaatcaaaggtaaatctgaggcc
ggggtcacaacattaggaaaaaaaatctcaaaccttgatagctgcattttaatttaccaa
tcaataacaggcatttttgaaaaaaggattgatttgttaaagatatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (16)   

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