KEGG   Thermococcus profundus: A3L09_09965
Entry
A3L09_09965       CDS       T05153                                 
Name
(GenBank) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
tprf  Thermococcus profundus
Pathway
tprf03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:tprf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    A3L09_09965
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:tprf03000]
    A3L09_09965
   03021 Transcription machinery [BR:tprf03021]
    A3L09_09965
Transcription factors [BR:tprf03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    A3L09_09965
Transcription machinery [BR:tprf03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     A3L09_09965
  RNA polymerase III system
    TFIIIB
     A3L09_09965
  RNA polymerase I system
    SL1/TIF-1B
     A3L09_09965
SSDB
Motif
Pfam: TBP DUF3378 AIRS_C UMPH-1
Other DBs
NCBI-ProteinID: ASJ03556
UniProt: A0A2Z2MCI0
Position
1877261..1877836
AA seq 191 aa
MVDMSNVKLRIENIVASVDLFAQLNLEKVIEICPNSKYNPEEFPGIICRFEVPKVALLIF
SSGKLVVTGAKSVDDIKNAVNKLTEMLRTKVGTQFTKPPQIDIQNMVFSGDIGVEFNLDA
VALSLPNCEYEPEQFPGVIYRVKDPKAVILLFSSGKIVCSGAKSENDAWEAVKKLLRELE
KYGLVEEEEEW
NT seq 576 nt   +upstreamnt  +downstreamnt
ttggtagacatgagcaatgttaagctcaggattgaaaatatagtcgcttctgttgacctc
tttgcacagctcaacctggagaaggttatagaaatctgcccgaactccaagtacaatcca
gaggagttcccggggatcatctgccgctttgaggtaccgaaggttgccctccttatattc
agctcaggaaagctcgtagttaccggcgcaaagagcgtcgacgacataaagaatgcggtt
aacaaactcacagagatgctcagaacaaaggtcggcacccagttcaccaagccgccccag
atagacattcagaatatggtcttcagcggggacattggggtggagttcaacctcgatgca
gttgcattaagccttccaaactgtgagtacgagcccgagcagttcccgggcgtcatctac
cgtgttaaggatccaaaggcagtgatactgctgttctcctcgggtaagatagtctgctcg
ggagctaagagcgagaacgatgcatgggaggccgtgaagaagctcctccgcgagctggag
aagtacggcctcgtggaagaagaggaagagtggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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