KEGG   Thalassiosira pseudonana: THAPSDRAFT_17312
Entry
THAPSDRAFT_17312  CDS       T01078                                 
Name
(RefSeq) hypothetical protein
  KO
K12663  Delta3,5-Delta2,4-dienoyl-CoA isomerase [EC:5.3.3.21]
Organism
tps  Thalassiosira pseudonana
Pathway
tps04146  Peroxisome
Brite
KEGG Orthology (KO) [BR:tps00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    THAPSDRAFT_17312
Enzymes [BR:tps01000]
 5. Isomerases
  5.3  Intramolecular oxidoreductases
   5.3.3  Transposing C=C bonds
    5.3.3.21  Delta3,5-Delta2,4-dienoyl-CoA isomerase
     THAPSDRAFT_17312
SSDB
Motif
Pfam: ECH_1 ECH_2
Other DBs
NCBI-GeneID: 7448466
NCBI-ProteinID: XP_002290519
JGI: 17312
UniProt: B8C1S6
Position
5:complement(220021..221033)
AA seq 256 aa
VTLDRPRKRNAINVKMWKEIGEAFNLLGTTGDGCRCILLTGSGKGFCGGIDLTDEKFFSG
ISPDNIDEDDNDAAITKRQDAARTSFAFKPQILQMQAAFTAVEQCTVPVVAAIHGACVGA
GVDLACCADIRVCSPNATFSVREARLGLAADVGTLQRLPKLVGFGSRVRELCLTGDDFSA
SDAYRIGFVSRVSESGSDLLHVANEICYKISQNSPVAVAVTKASLNYSRDHSVQEGLEHI
ALQNSSALMSKDLMKA
NT seq 768 nt   +upstreamnt  +downstreamnt
gtgacgttggatcgcccaagaaagagaaatgcgatcaatgtaaagatgtggaaagagata
ggagaagcgttcaatctactcggcacaacaggtgatggatgtcgatgtattctacttact
ggaagtggcaaaggcttttgtggaggcatagatctcacggatgaaaagttcttttctggg
atatcaccggacaacatcgacgaggatgataacgatgcagcaataacaaaacgacaggac
gccgcacgaacgtcatttgcattcaaaccacaaatccttcaaatgcaggcagccttcacc
gcagtagaacaatgcacagtgccagtagttgcagcaatccacggtgcctgtgtaggagct
ggtgttgatttagcatgttgcgccgatatacgtgtatgtagtccaaatgcaacgtttagc
gtgagagaggcgagacttgggcttgctgccgatgttggtactttgcagagattgcccaag
cttgttggcttcggttctcgtgtgagagagttgtgtcttactggtgacgactttagtgca
tcagatgcatacagaatcgggttcgtaagtcgagtaagtgaatctggaagcgaccttctc
catgtagcaaatgaaatatgctacaagattagccaaaacagcccagtggcagtggctgtt
acgaaagcatcgttgaactattctcgagatcattctgtgcaagaggggcttgagcatatt
gcgttacagaattcctcagcactaatgtcgaaagacttgatgaaagct

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (55)   
   KEGG ORTHOLOGY (1)   
   RefGene (50)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (65)   

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