KEGG   Thalassiosira pseudonana: THAPSDRAFT_20798
Entry
THAPSDRAFT_20798  CDS       T01078                                 
Name
(RefSeq) condensin-like protein
  KO
K06677  condensin complex subunit 1
Organism
tps  Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:tps00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tps03036]
    THAPSDRAFT_20798
Chromosome and associated proteins [BR:tps03036]
 Eukaryotic type
  Chromosome condensation proteins
   Condensin I
    THAPSDRAFT_20798
SSDB
Motif
Pfam: Cnd1 Cnd1_N Adaptin_N
Other DBs
NCBI-GeneID: 7451450
NCBI-ProteinID: XP_002286183
JGI: 20798
UniProt: B8BQQ4
Position
1:1330606..1335053
AA seq 1384 aa
MASTPSSSTFPIPSSFQELESPPYNLLPYPHSFSDDDEAARAESFEVLIRIVEGGNRTLV
NSSGLALFEEEEEEEEGECDAWNDGVRIQALYTLVRKSDSLAPATRARLVKALCDAVHHL
SSALANPGNTAMSSSSSPENNSTNNFVVSQSFRDAYACHIYMLFTLMFFTESQEKLGKSL
GVTSSTSSNSRSKKTTKKKNNSTNNSSTPSDSEALQTSRTLCATAMLTASQSMSTFASRL
WKRSVPDEAVIHLPCRIAYQMLESAMGVIARKASCGDEALKMIATTVDTYASCLLNTVVA
ALVDLLHTYDHMAVLVAELCTLVKETPSNILATELLREIGRLDTEGCHTETGGKASGIKN
VAPFISELAAVRPKVVLANISLLLPHLDAEPYVLRSAIVNSIGCILVRDDVFAEDNNNNN
KKVAASAVQAEKDKDGDSSSSDDNGEQEFKGEKKAVVKANTRASLFHILCDRTCDITSFT
RAAAIKVLNDLTEKSSLPLDRIMPVTAIAIDRLQDKTVMVRRYSMQLLTSLLENNPFMGM
LNPEPYRDKIIELEAYLKSNVPEEILKARDAALEETKNDEDGTMRELQEIESAALAAAIA
DAEAKRESEELSEAESQFLAKVRALKFASSALSFIEQFENANASFQTMLLSSNSSDVTEA
LRFFVRAKNFGLPCAVTGTKRSLALMWSNEVSIQDEVLRAFIEVFVAEPGSEGKELLPEN
QIAQNFLDLVGEATVSELASIEEALGRLVKKEIIPPEVFSILWQMASQAEGKLRASAMLV
ISMAASADPKIVDSAYRLQNLYDAGLGDYTEEHRDWKTARSAACALQRVARAKVDPSSAK
YIILDLITERLVAVARGDWCQDESEADTNEWFCAAEQAINAIFTISPSPEKVAIEILLGH
QAGIFGSPENPCNSANSLRLSRFFFVLGHIALKLLIYTEVLSSSVRRANAAKTVKKQESA
SGPKSSEDDAESKEDDEEEDAIEAELGIAAQAEAETERKVAEISENEIVGRGVISLFTPM
LLRVVANEEGNYSSPTLMLSATLALCKCMCVSKSFCEKHLPLLFSVLAKAPNDDQDLRAN
IVVALGDLAFRFPNEVEPYTPKIYACLRDKSTRVRRHTLMVLTHLILNDMVKVKGQVCEI
ALCLQDQESGIRDMARLLFHELSKRTNSPIYNLLPDIVSQLSQLCLKQEIFREIMMFLLS
FIKKERQNEMLLEKLIQRFPKCTAINQKADLAYCIAQLKINDKCVKCLNDTFKLYKDALF
DEDVLKNFMSVVSKAKKNSKLETKDTIQELEDKLNENAAAGLENVKANKKAQRAKARAAK
RVAHKKKVQEWEGESEGEEDKQSEAEMEDEADEENVSGNIQLPADGEGTKRRSGRSSRSK
AVVA
NT seq 4155 nt   +upstreamnt  +downstreamnt
atggcgtccacaccatcatcatccaccttccccatcccctcctccttccaagaactcgaa
tcgccaccgtacaacctcttgccctacccacacagcttctccgacgacgatgaagccgca
cgtgccgaatcgtttgaagtattgattcgtattgtggagggtggaaatcgtactttggtg
aatagtagtgggctggctttgttcgaggaggaggaggaggaggaagaaggggagtgtgat
gcgtggaatgatggagtgaggattcaggcgttgtacacgttggtcagaaaatccgactcg
ctagcaccagcaacacgagcgcgcctcgtcaaggccctctgcgatgccgtccatcatcta
tcctcggcactcgccaacccaggcaacacggccatgtcatcctcctcctctccagaaaac
aacagcactaacaactttgtagtatcgcaatccttccgtgacgcctacgcatgccacatt
tacatgctattcacgctcatgttcttcaccgaatctcaagaaaaattgggcaaatcactc
ggtgtcacctcgtccacatcctccaacagtcgctccaagaaaacaacaaagaaaaagaac
aactccaccaacaactcatccacgccctctgattccgaagcactccaaacctcacgcaca
ctctgcgccaccgccatgctcaccgcctcacaatccatgtccaccttcgcctcacgactc
tggaaacgttccgtccccgacgaagccgtcatacacctcccctgtcgtatcgcttatcaa
atgctcgagagtgccatgggagtgattgcacgaaaggcatcttgcggtgatgaggcattg
aaaatgattgcgactacggtggatacgtatgcttcgtgtttgttgaatacggtggtggcg
gcattggtcgatttacttcacacgtacgatcacatggcggtattggtggcggaattatgc
accctggtgaaggaaactccgagtaatatcctagcaacggaattattgagggagattgga
cgtttggataccgagggatgtcacacggaaacagggggaaaggccagtgggatcaagaat
gtggctccgtttataagcgaattggcggcggtgagaccaaaggtggtgttggcgaatatt
agtctgttgttgcctcatttggatgcggagccgtatgtgttgaggagtgctattgtgaat
tcgattgggtgtattttggtgagggatgatgtgttcgcggaggacaacaacaacaacaac
aaaaaggtggcagcctcagcagtacaggccgagaaggacaaggatggagattcctcttcg
tccgatgacaatggcgagcaagagttcaaaggagagaaaaaggcagtagtcaaggccaac
actcgtgcgtctctctttcacattctttgcgatcgtacctgtgatatcacgtcgtttaca
agggcggctgcgattaaagtgttgaatgatttgacggagaagtcgtcattgccgttggat
aggattatgcctgttacggctattgcgatcgataggttgcaggataaaactgtcatggtt
cgcagatattctatgcagctcctaacgtctcttctcgagaacaatcccttcatgggcatg
ctcaacccagaaccctaccgcgacaagattattgaactcgaagcctatcttaagagcaac
gtgcccgaagagattttgaaggcaagggatgcagctttggaggaaaccaagaatgacgag
gatggtaccatgagggagttgcaggagattgaatcggctgcattggcagcagccattgcg
gatgctgaggcaaagagggagtcggaggagttatccgaggcggaaagtcagtttctggcc
aaagttcgtgcattgaagtttgcttcgtcggccttgtcgttcattgagcaatttgagaat
gccaatgcttcgttccagaccatgcttctctcgtccaactcgtcggatgtcacggaggct
cttcgtttctttgtgagggccaagaactttggattgccctgtgcagtgactggtaccaag
cgttcacttgcgctcatgtggtcgaacgaagtgagcatccaggacgaggtgcttcgtgcc
ttcattgaggtctttgttgccgagcctggttcggaaggaaaagagctattgcccgagaat
cagattgctcagaactttttggatttggtgggtgaggctacagtgagtgagcttgcttcg
atcgaggaggcacttgggcgtcttgtgaagaaggagatcatccctcccgaagtcttctcc
atcctttggcagatggcctcgcaagcagagggaaagctcagggcttcggcaatgttggta
atctcaatggcagccagtgccgatccaaagattgtggacagtgcttaccgccttcagaat
ctctacgatgctggattgggtgactacacggaagagcaccgtgattggaagactgctcgt
tcggctgcctgcgctctccaacgtgtggcaagagccaaagtggacccatcctctgccaag
tacattattttggatctcatcaccgagcgtcttgtggctgttgcacgtggagattggtgc
caggatgagagcgaggcggacaccaatgagtggttctgtgctgctgagcaagcgatcaat
gccatcttcacaatcagtccatctcccgagaaggtcgccattgaaatcctactcggacat
caggctggaatctttggtagccccgagaatccatgcaactcggccaactctcttcgcctc
agtcgtttcttcttcgtgcttggtcacattgcactcaagctactcatctacaccgaagtg
ttgagcagctccgttcgacgcgcaaatgcagccaagactgtcaagaagcaagagtctgcg
tcgggaccaaaaagttccgaggatgatgcagagtcaaaggaagacgacgaggaggaagat
gccatcgaagccgagcttggcatcgctgcccaagccgaagcagagacagaacgcaaggtg
gcagagatctcggagaatgagattgttggaaggggtgtcatcagcttgttcactcccatg
ctcttgcgtgtcgtggccaatgaggaaggaaactattcatcaccgacgctcatgctaagt
gccacccttgctctctgtaagtgcatgtgtgtttccaagtccttctgcgagaagcacctt
ccacttctcttctccgtcttggccaaggcccccaacgacgatcaggaccttcgtgccaac
attgtcgttgctctaggagatcttgcattccgtttccctaacgaggtcgagccctacact
cccaagatctacgcctgccttcgtgacaagtcaacccgtgtccgccgtcacacgctcatg
gtcttgactcacttgatcctcaatgacatggtaaaggtcaagggacaagtttgtgagatt
gcactctgtctccaggaccaagagtcgggcatccgtgacatggctcgtctcttgttccac
gagttgagcaagagaaccaatagtcccatctacaatcttcttccggacatcgtgagtcag
ttgagtcagctttgcctcaagcaagagatcttccgagaaatcatgatgttcctcctcagt
ttcatcaagaaggaacgccagaatgaaatgctattggagaagttgatccaacgcttcccc
aagtgcaccgccatcaaccaaaaggctgaccttgcctactgcatcgcccaactcaagatc
aacgacaagtgtgtcaagtgcctcaacgataccttcaaactctataaggatgctctcttt
gacgaggatgtgctcaagaacttcatgtccgtcgtctccaaggccaagaagaactccaaa
cttgagacgaaggataccatccaggagcttgaagacaaactcaacgaaaacgcagctgcc
gggctcgagaatgtcaaggctaacaagaaggctcagcgtgccaaggctcgcgctgcgaag
cgtgtggctcataagaagaaggttcaggagtgggaaggcgagtccgaaggcgaggaggac
aaacaatcagaagccgagatggaggacgaagcagacgaggagaatgtgtcgggtaacatc
caacttccggcagatggtgaggggacaaagagaaggtcagggagatcatctcgatcaaag
gcagttgtagcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (183)   
   KEGG ORTHOLOGY (1)   
   RefGene (178)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (192)   

Download RDF
DBGET integrated database retrieval system