KEGG   Thalassiosira pseudonana: THAPSDRAFT_24907
Entry
THAPSDRAFT_24907  CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K14767  U3 small nucleolar RNA-associated protein 3
Organism
tps  Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:tps00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tps03009]
    THAPSDRAFT_24907
Ribosome biogenesis [BR:tps03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    THAPSDRAFT_24907
SSDB
Motif
Pfam: Sas10 Sas10_Utp3
Other DBs
NCBI-GeneID: 7451570
NCBI-ProteinID: XP_002293977
JGI: 24907
UniProt: B8CCQ0
Position
14:complement(776336..778920)
AA seq 713 aa
MGRKSRHSAKTGDQKLYKSRGDNDANTSSGARAGRVGSGGGGATRGGTNSDDDEMYNEVE
RYHNRREEEMLRLDDDDVYSGESEDDDGITTKREGVFDLGMGGSSDEDQDEDESDSEEEV
PKRKATVVADSSDDDDDVSSDDDDDNEESKPSTLNWGTTKSSYYHGDTADLEIGQEVEDA
YLEEEAGREVELARLEDMNEGDFMLDGDGESVSSEESEEKKSSSKKKQSKKRKQSPSSEE
EPAITSIKPPTSKQLATLSKKQKLKILKTSHPELLPLVQHFQPPVKEFLEQTSVATGALL
RSGGGSEAEAVGTTPSGLQYLLAKSMLQASKALNLSLYLLLKSDQASKTNSNNEILMADD
DADDIHSHPVMDRLNQLSQLTDKLQENVEDKTSGLKQQLHSLVKAAALMNGEDDSDASSD
EEDEGGVRAEDKEKDDASDATPASEEQQPLAQEGESSDSDEETESQGAIQRRIMTEARFA
LRNQDLDHDHKKSKSNQRQRRLAPSSSDFGDDTEEVTEKALAAGRKLASTMNSIAQKSSG
TKKKLAGDEDEDADEYERLQRGLSMMDEEFGWGGSDDDAKDGAGSMGEGDSEGFGDEDDG
EDFYQKIKSKSKAKKDARKQMYAVAPKYPRIEGDVEGERAIGRAIMKNRGLVAHKPKINR
NPRVKKREQYRKALIRRKGAVREVRTEEGHVYGGESTGIKSGISRSRKLGAGR
NT seq 2142 nt   +upstreamnt  +downstreamnt
atgggcagaaaatcacgacactcagccaaaacgggcgatcaaaaactgtacaagtctcgt
ggagacaatgatgccaacacatcaagtggtgctcgtgcaggtcgcgttggaagtggtggt
ggtggtgccacacgaggggggaccaactcagacgatgacgaaatgtacaacgaggtagaa
cgctatcataaccgtcgtgaagaggagatgctacgattagacgatgatgatgtctacagt
ggcgagagcgaggacgatgatggcatcaccaccaagagggagggtgtgtttgatttagga
atgggtggtagtagtgacgaagaccaggatgaagatgagagtgatagcgaggaagaggta
ccgaagcgaaaggctacggttgtagcggattcttccgatgatgatgacgatgtctcatca
gatgatgatgacgacaacgaagagtcgaaaccatccacgctcaactgggggaccaccaag
tcatcctactaccacggagacactgccgatttagagattggtcaagaagtcgaagacgcc
tacctcgaggaagaggcgggacgtgaggtggaattggcaagattggaggatatgaacgag
ggtgacttcatgttggatggggatggggagagtgtttctagtgaagagagtgaagaaaaa
aagagtagcagtaagaagaagcaatcaaagaaacgcaagcaatccccatcatcggaagaa
gaacctgccattacatcaatcaaaccgccgacatccaaacaactggcaacactctccaag
aagcaaaagttgaagatactcaagacgagtcatccagagttactaccgttagtacaacac
tttcaacctccggtaaaagagtttttagagcagacgagtgttgccactggggctttgtta
aggagtggtggggggagtgaggcagaggctgttggaacaacaccttcagggctacaatac
ctactcgcgaagtcaatgctccaagcatccaaagcattgaacttgtcgctatacctccta
ctcaagtccgatcaagcatctaaaaccaattccaacaacgagatactaatggccgacgat
gatgccgatgatatccatagccatcccgtcatggatagactgaatcagttgagtcagcta
accgacaagcttcaagaaaatgtagaggataagacgtctgggttgaagcaacaacttcat
agtttggtcaaggctgcagctttgatgaatggagaagatgactccgatgcctccagcgac
gaggaagacgagggcggtgtaagagcagaagacaaagaaaaggatgatgcttctgacgcc
actccagcctcggaagaacaacagcccctagctcaagaaggagaatcctccgacagtgac
gaagagacagaatcacaaggtgccatccaaagaagaataatgaccgaagcacgatttgca
ttacgcaatcaagacttggatcatgaccacaaaaagtccaaatcaaatcaacgtcaacga
agactcgccccttcatcctcagactttggagatgatactgaagaagtaactgagaaggcc
ctggccgccggtagaaagttggcatcgacaatgaattccattgcacaaaagtcgtctggt
acaaagaagaagctcgccggcgacgaagacgaagatgctgatgagtatgaaagattgcaa
cgtggactgtccatgatggacgaggagtttggctggggtggttctgacgatgatgcaaag
gatggagctggcagtatgggtgagggagacagtgaaggatttggagatgaggacgatgga
gaagatttctatcagaagattaagtccaagagcaaggctaagaaggatgcaaggaagcag
atgtacgctgttgcaccgaagtatcctaggattgagggagacgtcgaaggtgaacgtgcc
atcggaagagccataatgaagaatcgtggtctcgtcgcacacaaacccaaaatcaatcgc
aatccacgtgtcaagaagcgtgagcaataccgtaaggcactcatccgcaggaagggagct
gtgcgagaagttcgaaccgaggaagggcatgtgtatggtggagagagtacaggtatcaag
tcgggtattagtcgtagtagaaagcttggtgctggtagataa

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (216)   
   KEGG ORTHOLOGY (1)   
   RefGene (211)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (224)   

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