KEGG   Thalassiosira pseudonana: THAPSDRAFT_30154
Entry
THAPSDRAFT_30154  CDS       T01078                                 
Symbol
Rpl27
Name
(RefSeq) 60S subunit ribosomal protein L27
  KO
K02901  large subunit ribosomal protein L27e
Organism
tps  Thalassiosira pseudonana
Pathway
tps03010  Ribosome
Brite
KEGG Orthology (KO) [BR:tps00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    THAPSDRAFT_30154 (Rpl27)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:tps03011]
    THAPSDRAFT_30154 (Rpl27)
Ribosome [BR:tps03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    THAPSDRAFT_30154 (Rpl27)
SSDB
Motif
Pfam: Ribosomal_L27e KOW NAD_binding_5 V_ATPase_I_N
Other DBs
NCBI-GeneID: 7450265
NCBI-ProteinID: XP_002294111
JGI: 30154
UniProt: B8CDJ9
Position
15:610905..611397
AA seq 145 aa
MAIVKSGKVVIILAGRHAGKKAVVIKNIEDGNDDKQFSHCLVAGIARGPRKVTRGMSKKK
VEKRSRTMKPFVKYVNVRHVFPTRYQVDMDLKKAVDEADLLAADKKIEVKKALKKIFEDR
YLNQKEVTSEKKAAGSSYFFQKLRF
NT seq 438 nt   +upstreamnt  +downstreamnt
atggccatcgtcaaatccggaaaagtcgtcatcatcctcgcaggccgccacgccggtaag
aaagccgttgtcatcaaaaacattgaagacggaaacgacgacaaacaattctcccactgc
ctcgtcgccggaatcgcccgcggtcctcgcaaggtcacccgtggcatgagtaagaagaag
gtcgagaagaggtccaggaccatgaagccttttgtcaagtatgttaatgtgaggcatgtc
tttcctactcgttaccaggtcgatatggacttgaagaaggctgtggatgaggctgatctc
ctcgctgcagataagaagattgaggttaagaaggctttgaagaagatcttcgaggatcgt
tacctgaaccagaaggaggttacgagtgagaagaaggctgctggaagtagttacttcttc
cagaagctcaggttctaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (464)   
   KEGG ORTHOLOGY (1)   
   RefGene (459)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (475)   

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