KEGG   Thalassiosira pseudonana: THAPSDRAFT_33316
Entry
THAPSDRAFT_33316  CDS       T01078                                 
Symbol
DGD1
Name
(RefSeq) dtdp-glucose 4,6-dehydratase
  KO
K08678  UDP-glucuronate decarboxylase [EC:4.1.1.35]
Organism
tps  Thalassiosira pseudonana
Pathway
tps00520  Amino sugar and nucleotide sugar metabolism
tps01100  Metabolic pathways
tps01250  Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:tps00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00520 Amino sugar and nucleotide sugar metabolism
    THAPSDRAFT_33316 (DGD1)
Enzymes [BR:tps01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.35  UDP-glucuronate decarboxylase
     THAPSDRAFT_33316 (DGD1)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase NAD_binding_4 3Beta_HSD Polysacc_synt_2 RmlD_sub_bind adh_short TrkA_N KR
Other DBs
NCBI-GeneID: 7446752
NCBI-ProteinID: XP_002289621
JGI: 33316
UniProt: B8C113
Position
4:complement(273127..274373)
AA seq 314 aa
MKTPSLPDGKRKKILVTGGAGFVGSHLVDKLMMEGHEVIVIDNFFTGQRKNIEHWMHHPR
FSLVVHDVTEPIMLEVDEIYHLACPASPPHYQYNPVKTIKTSTMGTINMLGLAKRVKAKI
LLTSTSEIYGDPKVHPQPESYWGNVNTIGPRSCYDEGKRVAETMMYSYRNQNNVDVRVAR
IFNTFGPRMHPNDGRVVSNFIIQSLQDKPLTIYGDGSQTRSFQYVSDLVDGLHALMNGGY
DLPVNLGNPDEYTVKHFAEYIKEITGSASDISFLKATQDDPTQRKPDITTAKRELNWEPK
VTVKEGLQKTIQYF
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaagactcctagtttgccggatgggaagaggaagaagattttggttacgggtggtgct
ggatttgttggatcccatctagtcgacaaactaatgatggaaggccatgaggtaatcgta
atcgacaacttcttcaccggacaacgcaagaacattgaacattggatgcatcatcctcgt
ttcagcctcgtagtccacgatgtgactgaaccaatcatgttggaagtggatgagatttat
cacttggcttgtccagctagtcctcctcattatcagtacaatcctgtcaagactatcaag
actagtactatgggaactattaatatgttgggattggcaaagagggtgaaggccaagatt
ttgttgacttctacttctgagatctacggagaccccaaagttcatcctcaacctgagtct
tattggggtaatgtgaacactattggacctcgctcatgttacgacgaggggaaacgtgtt
gctgaaacaatgatgtattcctaccgcaatcaaaacaacgttgacgttcgcgtcgctcgt
atcttcaacacctttggaccgcgaatgcatcctaatgatggtagggttgtttccaacttc
atcattcaatccttgcaagacaagccattgacaatctacggtgacggaagtcagacgagg
agctttcaatacgtgtcggatttagtggatggattgcatgcattgatgaacggaggatat
gatttgccagtgaatctcggcaatcccgatgagtatacggtgaagcactttgcagagtac
atcaaagaaatcacggggagtgcatctgatatttcattcctgaaagctactcaagatgat
cctacgcaacgtaagccagacattaccacagcaaagcgtgagttgaattgggagccaaag
gtgacggtgaaggagggattgcaaaagactattcaatacttt

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (98)   
   KEGG ORTHOLOGY (1)   
   RefGene (93)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (121)   

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