KEGG   Thalassiosira pseudonana: THAPSDRAFT_35095
Entry
THAPSDRAFT_35095  CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K03355  anaphase-promoting complex subunit 8
Organism
tps  Thalassiosira pseudonana
Pathway
tps04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tps00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    THAPSDRAFT_35095
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tps04121]
    THAPSDRAFT_35095
   03036 Chromosome and associated proteins [BR:tps03036]
    THAPSDRAFT_35095
Ubiquitin system [BR:tps04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   APC/C
    Other subunits
     THAPSDRAFT_35095
Chromosome and associated proteins [BR:tps03036]
 Eukaryotic type
  Sister chromatid separation proteins
   APC/C complex
    THAPSDRAFT_35095
SSDB
Motif
Pfam: ANAPC8 TPR_1 TPR_8 TPR_2 TPR_16 TPR_14 TPR_11 TPR_12 TPR_19 TPR_17 TPR_7 ANAPC3 BTAD ChAPs TPR_10 TPR_15 Prok-TraM
Other DBs
NCBI-GeneID: 7448591
NCBI-ProteinID: XP_002291008
JGI: 35095
UniProt: B8C5H0
Position
6:640142..641824
AA seq 503 aa
DVELYAMTLFDLGEYSRAAHVLNGSFGQINPPRNDLNPIGIYLRAFSLYLEGERRKEEQV
TELRDPLERTALYNSNLPRLEADLHRAKELGNLDAFGLYAYGVVLKGLRGTKRAPLDTAH
EMLIQSILKYPFNWSAWLDLGDLCVEDPSIDQEVERALQPISGHWMYHFFCVHVFIENKA
NENAIAIIEKLAHGNSAEIDGELESGFFVQSAYLQSQLAMAYYDVRDYDSAHEHFLALSE
REPYRLDHMDAFSNVLYVKDQNVALSHLAHRSVTVDKYRPETCIIVGNYYSSKGRHEKAV
QYFQRALKLNRNYLSAWTLLGHEYIEMKNTAAAIEAYRRAVDISDREYRAWYGLGQTYEI
MNMLLHALFYFRKAAALHPHDARMWCAIGGCLLGLDRRGDAEKSYERAVSLGDGEGIATR
KLAELYREDGDEEKAAKCYLRHLELRYHSQLPGQFTEAEALLYLAYYYRDNLEYDAAILC
ATRLEDYPGPEKEQGKGLLRDVR
NT seq 1509 nt   +upstreamnt  +downstreamnt
gatgtggagttatacgcaatgactctctttgatctgggggaatacagtcgagctgcacat
gtattaaatggatcctttggacaaataaatcctccgcgaaacgatttgaatcctattgga
atatacctcagagctttttctctgtacctggagggcgagagacggaaggaagagcaagtt
acggagctaagggatccattagaacgaacagcattgtataattcaaacttgcctcgtctc
gaggcggatctacacagagcgaaggaactagggaatcttgatgcttttggtctctatgct
tacggggtggtgttgaaggggttgagagggacaaaacgagctcctcttgatactgctcac
gagatgttgattcaatccattttgaagtatccgttcaattggtcagcgtggttagactta
ggagatctttgtgtagaagatccgtcgattgaccaggaagtggaacgagctttacaaccc
atctctggtcattggatgtatcacttcttctgtgttcatgtctttattgagaacaaggcg
aacgaaaatgccattgcaatcattgaaaagctagcacacggaaacagtgcagagatagat
ggagagttggaatctggcttctttgttcaaagtgcataccttcaatctcagttggccatg
gcttactacgatgtccgagactacgattcggctcatgagcactttctcgccttgtcagaa
agggaaccgtatcgtctcgaccacatggatgcattctccaatgttctctacgtcaaggat
cagaacgttgcactctcgcatcttgctcatcgttccgttactgtggacaagtataggcca
gagacatgcattattgtcggaaactactactccagcaaaggacggcacgagaaagccgtg
caatactttcaacgagcactcaaattgaatcgaaactacttgagtgcgtggacattgttg
ggacacgagtacattgagatgaagaatactgctgcggcaatagaggcgtaccgtcgtgca
gtggatattagcgacagagagtacagagcgtggtatggtcttggacagacatacgagatt
atgaacatgttgctgcatgcattgttctacttccgaaaggcggctgctcttcatcctcat
gatgctcgaatgtggtgtgccattggtggatgtcttcttggacttgatcgacgaggtgat
gctgaaaaaagttatgaacgtgccgtgtcactgggtgacggcgaaggtatcgctacgagg
aaacttgctgagttgtatcgcgaagacggagacgaggagaaggcagctaagtgctatctc
cgtcatttggaattgagatatcactcacagctgccaggtcagttcactgaggccgaggcg
ctgctgtatcttgcctactactatcgcgacaacctggaatatgatgctgctattctttgc
gctactcgactagaggactatcctggccccgagaaggagcaaggaaagggcctgctgaga
gatgttcgt

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (102)   
   KEGG ORTHOLOGY (1)   
   RefGene (97)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (17)   
   Pfam (17)   
All databases (127)   

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