KEGG   Thalassiosira pseudonana: THAPSDRAFT_42447
Entry
THAPSDRAFT_42447  CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K14411  RNA-binding protein Musashi
Organism
tps  Thalassiosira pseudonana
Pathway
tps03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tps00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    THAPSDRAFT_42447
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tps03019]
    THAPSDRAFT_42447
Messenger RNA biogenesis [BR:tps03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     THAPSDRAFT_42447
SSDB
Motif
Pfam: RRM_1 RRM_7 PHM7_cyt
Other DBs
NCBI-GeneID: 7451569
NCBI-ProteinID: XP_002293976
JGI: 42447
UniProt: B8CCP8
Position
14:complement(774274..775101)
AA seq 176 aa
MSYYGNASATPSTAAAHLASNIDAAKIFVGGLSWQTTEETLRYHFEQYGEVSSVEVMRDR
NTGDPRGFAFVVFKSDETVELILNSGPQEINHKVVDIKRAQARGVAPPSIHGAEDASVSS
GGGQTNTRFKQEGNSLLSPEQLKNKIFVGGLPLHVDKDGMKDFFSVFGVVTDAIVM
NT seq 528 nt   +upstreamnt  +downstreamnt
atgtcctactacggcaacgcatccgccacaccctccaccgccgccgcccacctggcatcc
aacatcgacgctgccaaaatcttcgtaggcggtctctcctggcagactaccgaagaaaca
ctccgttatcactttgagcaatacggagaagtgtcatcagtggaagttatgagagatagg
aatacgggtgatcctaggggctttgcgtttgtggttttcaagagtgatgagacggtagag
ttgatattgaatagtggacctcaggagattaaccacaaggttgtggatattaagagggcg
caggctaggggtgtggcacctccaagcattcacggagcagaggacgccagcgtaagcagc
ggaggaggacaaacgaatactcgcttcaagcaagaaggcaactccctcctctcccccgaa
caactcaaaaacaaaatctttgttggaggtcttcccttgcacgtagacaaggatggaatg
aaagacttcttctccgtctttggtgtagttactgatgctattgtcatg

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (44)   
   KEGG ORTHOLOGY (1)   
   RefGene (39)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (54)   

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