KEGG T00525: Tpet

Thermotoga petrophila RKU-1: Tpet_0666

Entry

Tpet_0666         CDS       T00525

Name

(GenBank) DNA topoisomerase I

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

tpt Thermotoga petrophila RKU-1

Brite

KEGG Orthology (KO) [BR:tpt00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tpt03032]
    Tpet_0666
   03400 DNA repair and recombination proteins [BR:tpt03400]
    Tpet_0666
Enzymes [BR:tpt01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     Tpet_0666
DNA replication proteins [BR:tpt03032]
Prokaryotic type
  DNA Topoisomerases
   Tpet_0666
DNA repair and recombination proteins [BR:tpt03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      Tpet_0666

SSDB

Motif

Pfam:

Topoisom_bac Toprim HTH_17

Other DBs

NCBI-ProteinID:

ABQ46686

UniProt:

A5IKG3

Position

complement(674694..676595)

AA seq 633 aa
MNRKVKKYIVVESPAKAKTIKSILGNEYEVFASMGHIIDLPKSKFGIDLEKDFEPEFVVI
KGKEKVVEKLKDLAKKGELLIASDMDREGEAIAWHIARVTNTLGKKNRIVFSEITPRVIR
EAVKNPREIDMKKVRAQLARRILDRIVGYSLSPVLWRNFKTNLSAGRVQSATLKLVCDRE
REILRFVPKKYHKITVKFDGLTAEIDVKEKKFFDSETLKEIKSIDELVVEEKEVSLKNFS
PPEPFKTSTLQQEAYSKLGFSVSKTMMIAQQLYEGVETKDGHIAFITYMRTDSTRVSDYA
KDEARNLITEVFGEDYVGAKGAKRKGNTKIQDAHEAIRPTNVFMTPEEAGKYLNPDQKKL
YELIWKRFLASQMKPSQYEETRFVLRTKDGKYRFKGTVLKKIFDGYEKVWTTERNTGEFP
FEEGESVKPVVVEIEEQETKPKPRYTEGSLVKEMERLGIGRPSTYASTIKLLLNRGYIKK
IRGYLYPTVVGSVVMDYLEKKYSDVVSVSFTAEMEKDLDEVEQGKKTDKIVLQEFYQSFS
SVFDRNDRIVIDFPTNQKCSCGKEMRLSFGKYGFYLKCECGSTRSVRNDEIAVIDDGKIF
LGRKDSESGSPDGRSIKGKRNLPEKRRKGKKSS

NT seq 1902 nt +upstreamnt +downstreamnt
atgaataggaaagtgaagaaatacatcgtcgttgagtctcctgccaaggcgaagacgatc
aagagtattcttggaaacgaatacgaagtcttcgcttcgatgggtcatatcatagatctt
cccaaaagtaaatttgggatagatctggaaaaggatttcgaaccggaattcgtggtaata
aaagggaaagaaaaagtggtcgaaaagctgaaagatcttgcaaaaaagggagaactgctc
atcgcttctgatatggatagggaaggagaagctatagcctggcacatagccagagtgacg
aacactcttgggaagaagaacagaattgtgttctctgagatcactcctcgcgtgataaga
gaagccgttaaaaatcctcgagaaattgacatgaagaaagttcgagcacagcttgcaagg
agaattctggataggatcgttggttattctctgagtccggtactctggagaaattttaaa
accaacctgagcgctggcagggtccaatcggctacactgaagctcgtttgtgatagagag
agagaaatcctcaggtttgtaccaaagaagtaccacaagatcaccgtcaaattcgatggt
ctcacggcagaaatagatgtgaaagaaaagaagtttttcgactctgaaacgttgaaagag
atcaagagtatagacgaactcgtcgtagaggagaaagaggtttctttgaaaaacttttca
cctccagaacccttcaaaaccagtaccctccagcaggaggcgtattccaaactgggtttc
tccgtttccaaaaccatgatgatcgcccagcagttgtatgaaggtgtagaaacgaaagat
gggcatatcgcgttcataacctatatgagaacagattcaacgcgtgtatcggattacgcg
aaagatgaagccaggaatctgataacagaagtctttggagaggattatgttggtgcgaaa
ggagcaaagagaaaaggcaacacaaaaatacaggatgcgcacgaagcgattcgtcccacg
aacgttttcatgacacccgaggaagcggggaaatacctgaatcctgaccagaaaaaactc
tacgagttgatatggaagagatttctcgcttctcagatgaagccttctcaatacgaagaa
actcgctttgtcctgagaacaaaagacggaaagtacagattcaaaggaacggtgttgaaa
aagattttcgatggatacgaaaaggtgtggacgacggaaagaaacacaggggagtttcct
ttcgaagaaggagaatctgtgaaaccggtggttgtagaaatagaagaacaggaaaccaaa
ccaaaaccaaggtacactgaaggttcactcgtgaaggaaatggaaaggcttggtataggt
cgtcccagcacctacgcatccacgataaagctcctgttgaataggggttacataaagaag
atcagaggttatctctatcctactgtcgttggaagtgttgtcatggattatctggagaaa
aagtactccgacgttgttagcgtttctttcacggctgagatggagaaggatctcgatgaa
gtcgaacagggcaagaagacagacaagatcgtcttgcaagagttttatcaatccttttcc
agtgtgttcgataggaacgacaggattgtgatcgattttccaacgaaccagaaatgttcg
tgtggaaaagaaatgagactctcttttgggaaatacggcttctatttgaaatgtgagtgt
ggtagcaccagaagcgtgagaaacgatgaaattgcagtcatagacgatggaaaaatattc
ctggggaggaaagacagtgagagtggctctcctgatgggaggagtatcaagggaaagaga
aatctccctgagaagcggagaaagggtaaaaaaagctcttga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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