KEGG   Thermotoga petrophila RKU-1: Tpet_0937
Entry
Tpet_0937         CDS       T00525                                 
Name
(GenBank) 2'-5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
tpt  Thermotoga petrophila RKU-1
Brite
KEGG Orthology (KO) [BR:tpt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tpt03016]
    Tpet_0937
Enzymes [BR:tpt01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     Tpet_0937
Transfer RNA biogenesis [BR:tpt03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    Tpet_0937
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2 AKAP7_NLS HVSL Dynein_heavy SBDS_domain_II Corona_NS2A
Other DBs
NCBI-ProteinID: ABQ46955
UniProt: A5IL82
Position
958716..959279
AA seq 187 aa
MRTFIAIDVNEEVKKQASEIIEKLMRRGFGATWVSEENMHLTLFFLGEVDEQKISEIAEH
LCRRVRGFPSFSFTVKGFGYFKRKMSPRVFWLGVENTDRLMKLYEELRNELSHHGFSFEE
KFVPHITIGRVKYYPDKWEKLIEDIDFPPIEVAVDRFKIYSSTLTPTGPIYRVLYECQFE
GGLIRYV
NT seq 564 nt   +upstreamnt  +downstreamnt
atgaggaccttcattgctatcgatgttaacgaagaagtcaagaagcaagcttctgaaatc
atagaaaaactcatgagaagaggttttggtgcaacgtgggtttctgaagaaaacatgcac
ctcacactttttttcctgggggaggttgacgaacaaaaaatctctgaaatagccgaacac
ctctgtagaagggtgagaggttttccttctttttcgttcaccgtgaagggttttgggtac
ttcaaaaggaagatgtctccgcgcgtcttctggctcggagtggagaacactgatcgcctg
atgaaactctacgaagagctcagaaacgagctgtctcaccacggtttttcgtttgaagag
aagttcgtccctcacattacgattggaagggtgaagtactacccggacaaatgggaaaaa
ctgatcgaagacatcgattttccacccatcgaagttgctgtggacagattcaagatttac
tcgtccacgttaacaccgacgggtcccatctacagagttctttacgaatgccagtttgaa
ggaggattgatcaggtatgtctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (20)   

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