KEGG   Turneriella parva: Turpa_0696
Entry
Turpa_0696        CDS       T02157                                 
Name
(GenBank) Excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
tpx  Turneriella parva
Pathway
tpx03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tpx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Turpa_0696
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tpx03400]
    Turpa_0696
DNA repair and recombination proteins [BR:tpx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Turpa_0696
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG UVR Flagellin_IN
Other DBs
NCBI-ProteinID: AFM11347
UniProt: I4B240
Position
complement(702468..704432)
AA seq 654 aa
MSELTLSERIAHAPDSCGVYQWFESADSKTPLYVGKAKKLRARLRQYLTSDDLKTTFLMK
RAREIRWIATENETEALLLENNLIKKHRPVYNVRLKDDKQYPYICISMSEAYPRIYLTRR
RLPGNLYFGPFSKAQVAREKIQLTLDMFPLRRRPLKLPLAKPAKPCLNYHLKKCLAPCAE
KINREDYGKIVQQAIDFISGDDAEMRQQVEQKMHLLASETKFEEAAKLRDILAYFNERNL
SPQVEMQNVTPAFDIVGIYSADYETLKSELSLRDEDISPHPLTPSSSVEGEERSTGGEVR
FAQICLLKFRDGRLIAKENFSVTETDMAASALTDADFAETFFRDYYLGMLDLPAYIVVPN
GLELGEWSKALSASVRVLQLGEFSETAALSGREINPQALMQMATNNARLVMRERLLSENL
RNQRIGLKQLQKFLGLKAPPQLIECYDISNIQGSEPVASGVMLRDGMPYKSGYRKYRIKT
VEGANDPAMMYEAISRRLARVKTGEVAAADLIVIDGGSTQLGAAMRARTEAGLTIPMMGL
AKKLEEIYTEDGKILRFDKESPGMQILRRARDEAHRFAVSYHRNLRMKRNLRSVFDGIEG
IGEKKRAAILLALRKADLGGMTAEALAKKIKKETGVSAEVSAALAQKIFTGLPG
NT seq 1965 nt   +upstreamnt  +downstreamnt
atgtcagagctgacgctttctgaacgcatcgcccacgcgcccgacagctgcggcgtgtac
cagtggttcgaaagcgcagacagcaagacaccgctctatgtcggcaaagctaaaaagctg
cgcgcccgcctgcggcaatacctgacctcagacgatctcaagacgactttcttgatgaag
cgtgcacgcgaaatcaggtggattgcgactgaaaacgagaccgaagcgctgctgcttgag
aacaacctcatcaagaagcatcgtccggtttacaatgttcggctcaaagatgacaaacag
tatccctatatctgcatttcgatgagcgaagcctacccgcgaatttacctgactcgccgc
cgcctgccaggtaatctctactttgggccgttttcaaaagcgcaggtggctcgcgagaag
attcagctgacgctcgatatgtttccgctgcggcgccggcctctcaaactgccgctcgcc
aaacctgcgaaaccctgtttgaactaccatctgaagaagtgccttgcgccctgcgctgaa
aagatcaatcgcgaagactacggcaaaattgtgcagcaggcgatcgacttcatctcaggc
gatgacgccgaaatgcgccagcaggttgagcagaaaatgcatctgctggcgtctgaaacg
aaattcgaagaggccgcaaaactgcgtgatattctcgcgtacttcaatgagcgcaacctc
agcccgcaggttgaaatgcaaaacgtaactcctgcgttcgatattgtcggcatctattca
gccgattatgaaacgctcaaatcagagctgtcgctgcgcgacgaagacataagccctcac
cccctgaccccctcttcttcagtagagggtgaggagcgtagcacagggggtgaggtgcgg
tttgcccagatttgcctgctgaagtttcgcgacggcaggctcatcgccaaagaaaatttt
tcagtgaccgagaccgacatggcagccagtgcgctcaccgatgccgatttcgccgagacg
ttcttcagagattactatctcggcatgctcgatttgccggcatacattgttgtgcccaat
ggtcttgagctgggcgagtggagtaaagccctgtcggcaagcgtgcgggtgcttcagctg
ggtgagttttcagaaacagcggcactcagcggcagagaaatcaatccgcaggcattgatg
cagatggcgaccaacaacgcacggcttgtgatgcgcgaacgattgctttcagaaaatctg
cgtaaccaacgaatcggtctgaagcagttgcagaagttcttgggcctcaaagcgccgccg
cagctgattgaatgctacgatatctcgaatattcagggtagcgaacccgtcgcaagcgga
gtgatgctgcgagatggcatgccgtacaagtcaggttaccgcaaataccgcatcaagacc
gttgaaggggcgaacgaccctgcaatgatgtacgaggcaatctcgcggcggctcgcgcgc
gtgaagactggcgaagttgccgcagcagatctgatcgtcatcgatggtggcagcacccag
ctgggcgcggcgatgcgcgcccgcactgaggctggtctgacgatacccatgatggggctt
gccaaaaagcttgaagagatttacaccgaagacggaaaaattctgcgcttcgataaagaa
agcccgggtatgcagatattgcggcgcgcccgcgatgaggctcaccgtttcgccgtgagc
taccaccgcaatctgcgcatgaagcgcaatttgcgctcagtattcgacggtatcgaaggt
atcggcgaaaagaagcgggcagcgattctgctcgcgctgcgcaaagctgacctcggtggt
atgactgccgaagctctcgccaaaaaaatcaagaaagaaacgggcgtcagcgccgaggtg
tcagcggcgctcgcgcagaaaattttcacaggcctgccagggtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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