KEGG   Trueperella pyogenes TP6375: CQ11_08420
Entry
CQ11_08420        CDS       T03070                                 
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
tpy  Trueperella pyogenes TP6375
Brite
KEGG Orthology (KO) [BR:tpy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tpy03032]
    CQ11_08420
   03400 DNA repair and recombination proteins [BR:tpy03400]
    CQ11_08420
Enzymes [BR:tpy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     CQ11_08420
DNA replication proteins [BR:tpy03032]
 Prokaryotic type
  DNA Topoisomerases
   CQ11_08420
DNA repair and recombination proteins [BR:tpy03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      CQ11_08420
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim SBP_bac_3 Toprim_4 Toprim_2
Other DBs
NCBI-ProteinID: AHU89973
Position
1787534..1790239
AA seq 901 aa
MTKLVIVESPAKARTIGNYVGSDFVVEASIGHIRDLPRPSELPAEMKKGSFGKFAVDIDH
DFDPYYVVNADKKKKVSELKKALKDADTLYLATDEDREGEAIAWHLLQVLQPKIPVKRMV
FHEITKEAITRALDATRDIDEQLVDAQETRRILDRLVGYEVSPLLWRKVAPGLSAGRVQS
VTTRLVVERERERMAFVPASYWDVAVQHTKDGQAFESKLYALDGARIASGKDFSDDGQLT
AKAEKAGVRTLDSATATAVAEALQGGQAWVSSVETKPYRRRPAAPFTTSTLQQEASRKLH
LSSRDTMRVAQSLYENGFITYMRTDSTNLSDEAISAARRQIKELYGAASLPETPRIYAAK
AKGAQEAHEAIRPAGDHFRTPQQVENQLRGREFQLYELIWKRTIASQMADATGSTASVRL
VADIQVAGASQEATLAASGTIITFRGFLAAYEEGQDTKRYEDESQSRLPDLVEGEHVDNV
EASADGHETTPPPRYTEASLVRTLEERGIGRPSTYASTISTVIDRGYIDKKGNALVPTWT
AFSVVRLLEDNLPELVDYDFTADMESDLDAIAAGLKSRVEYLAGFYYGTDEIKGLHGLVD
GLGDIDARAVNTIDLSDTIAVRVGRYGPYLEESSGDTVTRRANIPPEVTPDELTLAKATA
LLDAAMQEDRELGKDPETGYSIVVKDGRFGPYVSEVLPDDAVAYTPTGKVSKVKPKPRTA
SLFASMSPETVTIEDALRLLSLPREVGESDGEMIVATNGRYGPYMKRGSDSRSLESEEQI
FSITLEEAEAIFAQPKVRGQRQARPPLAELGKDPVSGGNILLKDGRFGPYVTDGETNASL
PRSEDINQITPERAQELLVQRRLKIAEQGGPKARNKAKKTVRSLAKKSTAKKATTKKTAK
K
NT seq 2706 nt   +upstreamnt  +downstreamnt
atgacgaagcttgtcatcgtcgagtctcctgccaaggctcgcacgattgggaactatgtg
ggttccgacttcgtggttgaagcatccattggccatattcgcgatctcccgcgcccatcg
gagctcccagccgaaatgaagaagggctcttttggcaagttcgccgtggatatcgaccac
gatttcgatccgtattacgtggtgaacgcggacaagaagaaaaaggtatctgagctgaag
aaagcgctcaaagatgccgacaccctctacctggcaaccgatgaggatcgggaaggtgag
gccattgcatggcatctgcttcaggtgcttcaaccgaagatcccggtcaagcgcatggtc
ttccacgagatcacgaaggaagcgatcacccgcgcgctcgatgctactcgcgacatcgac
gaacagctagtcgatgcccaggaaacgcgccgcattctcgatcgcctcgtgggctatgag
gtctccccgctgctgtggcgcaaggttgcgcccggcctgtccgccggccgtgtccagtcc
gtgaccacccgcctcgtcgtcgagcgcgaacgggagcgaatggcgttcgtgcccgcctcc
tactgggatgtggccgtgcagcacacgaaagacgggcaggctttcgaatccaagctctac
gcgttagatggcgcccgaatcgcctcgggcaaggatttcagcgacgacggccagctgaca
gctaaggctgaaaaggcgggcgtgcgcacgctcgactccgcaacggcgacggccgtggct
gaagcattgcaaggcgggcaggcgtgggtatcttcggtggagacgaagccctaccggcgt
cgcccggcggcgccgttcaccacttccacgctccagcaagaagcctcccgcaagctgcat
ctgtcttcacgtgacaccatgcgcgtggcgcagtccttgtacgaaaacggcttcatcacc
tatatgcgaacggattcgacaaacctctccgacgaggcgatttccgcagcccgccgccag
ataaaggagctgtacggtgcggcgtccttgccagagacaccgcgtatctatgctgcgaag
gcgaagggagcgcaggaagcccacgaagccatccgtcccgccggggaccacttccgtacc
ccacaacaggtggaaaaccagctgcgtggccgcgaattccagttatacgagctgatctgg
aagcgcacgatcgcctcccagatggccgatgccacggggtcgactgcctcggtgcgcctt
gttgccgacatccaggtagctggagctagccaggaagccacgttggcggcttcgggaacg
atcatcacgttccgcggattcctcgcggcctatgaagagggccaggacacgaaacgttac
gaggatgagtcccagtcccggctgcccgatcttgtggaaggcgaacacgtggataacgtg
gaggcttcggctgacggccacgagaccaccccaccgccgcgttacacggaagcttcgctg
gttcgcacgctcgaggagcggggaatcgggcgtccgtccacgtatgcgtccacgatttcg
actgtcatcgaccgcggttacatcgacaagaaaggtaacgccctcgtacccacctggacc
gctttctccgtggttcgcctcctcgaggataacctccctgagctggtcgattatgacttc
actgcggacatggaatcggatctcgacgcgatcgctgcaggtctaaagagccgcgttgag
tacttggccggcttctactacggcacggatgagatcaagggcttacatgggctggtcgac
ggcctgggcgacatcgacgcgcgcgcggtcaacaccatcgacctctcggacacgatcgcc
gtgcgcgttggccgctacgggccctacctcgaagaaagctccggagataccgtcacgcgg
cgcgccaacatcccgcccgaagtcactcccgacgagctgacgctcgccaaggccacagca
ctactcgacgcagcgatgcaggaggatcgcgaactgggcaaggatccagaaaccggctac
tcaatcgttgtcaaagacggccgctttggtccctacgtttccgaagtactgcccgacgac
gccgtggcctacacgcccactggcaaggtctcgaaggtcaagccgaagccgaggacggcg
tcgttgtttgcgtcaatgagcccggagacagtgacgatcgaggacgcgctcagactgctc
tccctgccgcgtgaggtgggcgaatcggatggggaaatgatcgtggccaccaatggccgt
tacgggccttacatgaaacgcggctcagactcgcgctcgttagagagcgaagagcaaatc
ttctccatcacactcgaagaagcagaggccattttcgcgcagccgaaagtacgcgggcag
cgccaggcccgcccgccgcttgccgaactcggcaaagatccggtctcgggcggaaacatc
ctgctcaaggacggccggtttggtccctacgtgacagacggtgaaacgaacgcttccctg
ccacgctcggaggacatcaaccagatcaccccagaacgcgcccaagaactcctcgtccaa
cggcgcctgaagatcgctgaacaaggcgggccgaaggcgcgcaacaaggcgaagaaaaca
gtgcgctctttagcaaagaagtccaccgccaaaaaggccactacgaagaaaacggcgaag
aagtag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (26)   

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