KEGG   Trueperella pyogenes TP8: X956_05560
Entry
X956_05560        CDS       T03579                                 
Name
(GenBank) excinuclease ABC subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
tpyo  Trueperella pyogenes TP8
Pathway
tpyo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tpyo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    X956_05560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tpyo03400]
    X956_05560
DNA repair and recombination proteins [BR:tpyo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     X956_05560
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG HHH_5 HHH_2 UVR HHH HHH_3 GIY_YIG_domain ZNRF_3_ecto MciZ
Other DBs
NCBI-ProteinID: AJC69595
Position
complement(1158975..1160951)
AA seq 658 aa
MANPESYRPRTSDIPKDPGVYRFIDPDDRVIYVGKAKNLRQRLQNYFQDPDLLHPRTRQM
VFTAVRVEWVVVGSEIEALTLEYSWIKEFTPRFNVMYRDDKSYPYLAITMTEEYPRVMVT
RNAHKRGDRYYGPYTKVWAVRDSLDQLLRVFPIRSCSAGTFRGAQRAGRPCLLGYIGKCS
APCVERVSAEEHRDIAQQMVRFLDGTGEDLIREKKQDMLKAAAELDFERAGRLRDDIRAL
EVVAERNTVVLDASVDADVFGLVFDELEASVQVFFVRGGRIRGQRGWISAIEDADGAGLV
SQLLIQVYGEYSQARSGRKAKARATSVDDVAHTAATELPREIWVPTLPDDDALVTWLSDL
RGANVALKIPQRGAKAQLMETVNTNAAQALQRHKLARAGDITERSQALEELRDGLGLERA
PLRIEGYDISHTQGTNQVGSMVVFEDGLAKKSDYRHYIIRGDDGAGARDDTAAMDEVLRR
RLKRLAEDQEGSPSEGKSADTASKPRFAYRPDLIVVDGGLPQVNAAQRVVEELGANVAVI
GLAKRLEEIWIPGMDFPVILSRTSPALRLLQHLRDESHRFAITFHRKKRAAAMTRSALDD
IAGLGPAKQAALLKHFKSVARIKAASIVDLQAVAGIGPALATTIYTHFAGNSDEKLAR
NT seq 1977 nt   +upstreamnt  +downstreamnt
atggccaaccctgagagctatcgccccaggacgagcgatatcccgaaggatccgggcgtc
tatcgtttcatcgatccagacgaccgggtaatttacgtgggaaaagcgaagaaccttcgc
cagcgtctgcaaaactattttcaggaccctgatctgcttcatccgcgcacgcgtcagatg
gtattcaccgccgtgcgcgtggagtgggtcgtggtgggcagtgagatcgaagctctcact
ctggagtattcatggatcaaggagtttacgccgcgcttcaacgtgatgtatcgcgacgac
aaatcctatccctacctcgccatcacgatgactgaggagtatccgcgcgtcatggtcacc
cgcaacgcgcacaagcgaggtgatcgttactacggcccatacacgaaggtgtgggccgtg
cgcgactcgctcgaccagctcctacgcgtttttccgattcgctcgtgcagtgctggcaca
tttcggggcgcgcagcgcgctggcagaccgtgcctacttggatacatcggtaagtgttcg
gctccgtgcgtggagcgcgtgagtgccgaggaacaccgcgatatcgcgcaacagatggtg
cgtttcctcgacggcacgggggaggatctcatccgggaaaagaagcaggatatgctcaaa
gccgctgctgagcttgactttgagcgtgcggggcgcctgcgcgatgacatccgtgcgctc
gaagtggttgccgagcgcaataccgtggttctcgacgcgagtgttgacgccgacgtcttc
ggcctcgtcttcgacgagctcgaggcttctgtccaagtgtttttcgtccgcggtgggcgc
atacgcggtcaacgcggatggatctcggcgattgaggacgcggacggagccggcctggtc
agccagctcctcattcaggtctatggtgagtacagccaggcccgctctggccggaaggcg
aaggcgcgtgccacgtcagttgacgacgtcgcccacaccgccgccactgagcttcctcgg
gagatctgggtaccgacgcttcccgacgacgatgccctcgttacctggctatctgattta
cgtggcgcgaatgtggctctcaagattccgcagcggggcgctaaggcgcaactgatggag
acggtcaacaccaacgctgcccaggcgctacaacgccacaagcttgcgcgcgcaggggat
atcacggagcgctcccaggcgcttgaagaacttcgcgacgggctcggccttgagcgggct
ccgctgcgtatcgaaggttacgacatctctcacacccagggcaccaaccaggtcgggtca
atggtcgtttttgaggatggcctggccaaaaagtccgactatcgtcactacattatccgt
ggcgatgacggggcgggcgcgcgcgatgacaccgctgcaatggatgaggtcttgcggcgt
cgtctcaaacggctcgccgaggatcaggagggcagcccatcggaggggaaatcggcggac
accgcatcgaaaccgcgattcgcgtaccgtcccgatctcatcgtggtcgacggcgggttg
ccgcaggtgaatgctgcgcagcgggttgttgaggagttaggggccaatgtcgcggtgatt
gggctggccaagcgtttagaggagatctggattccggggatggatttccctgtgatcctt
tcgcgcacttccccggcgctgcggctgctccagcatcttcgcgatgagtcccaccgcttt
gccatcacgttccaccgtaaaaagcgcgcggcggcgatgacgcgctcggctctcgacgac
atcgccggactagggccagccaagcaggccgcgttactcaaacatttcaagtcggtggcg
cggataaaggccgcgagtatcgtagatctccaggcagtggccggtatcgggccggcactg
gcgacgacgatctacactcactttgcaggaaactcggatgaaaaactggcacgatag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (17)   

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