KEGG   Thermacetogenium phaeum: Tph_c06730
Entry
Tph_c06730        CDS       T02276                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor RpoN
  KO
K03092  RNA polymerase sigma-54 factor
Organism
tpz  Thermacetogenium phaeum
Pathway
tpz02020  Two-component system
tpz02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:tpz00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Tph_c06730 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    Tph_c06730 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tpz03021]
    Tph_c06730 (rpoN)
Transcription machinery [BR:tpz03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Tph_c06730 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR HTH_17 HTH_3 HTH_Crp_2 HTH_23 LacI Arg_repressor MarR HTH_21
Other DBs
NCBI-ProteinID: AFV10907
UniProt: K4LFP9
Position
702872..704275
AA seq 467 aa
MRLSYGINLEQTQKLIMTPELRQAITVLQLSAVDLAQYVENAMLENPLLEVTEDADAEGV
ASSEKFKDDFTREWCEYLSECGQVDRSFDRAWAEEEGERYNFEHFVAQVPTLSEHLDLQL
RLALSDPRDLKIGEFLIGNINDRGYLQISLEEVERTYGYPVRETERILKIIQSFDPPGVG
ARDLSECLLIQLEQRGWRTPALEKLVRFYLGDLANGNLLKIAAALDLPVQDVQHMADLIK
TLDPIPGRNFSRPGENRYIAPDVVVEKFDDEYIILVNDISVPRLMINKTYQSLLNQQESC
DPGTAQFIQNKLKSAIWLIRSIEQRRLTLYRVVSCIVEFQKEFLDKGVKHLKPLNLKQIA
DAAGLHESTVSRAIANKYIQTPQGLFELKFFFTSGVENVLAGKMVAAESIKQVLKELIAG
EDPCRPYSDQQLCELLQAKGINIARRTVAKYRQEIGIPPVRQRKRYR
NT seq 1404 nt   +upstreamnt  +downstreamnt
atgcgcttgagttatgggatcaacctggagcagacccaaaaactgatcatgacaccggaa
ttgcgccaggcgatcactgtgcttcagctttcggcggtggatctcgctcaatacgtggaa
aacgccatgctggaaaatcctctccttgaagttaccgaggatgctgatgctgagggggtg
gcgtcttccgagaagttcaaagatgattttacgcgggaatggtgtgaatacctttcggag
tgcggccaggttgacaggtcctttgaccgcgcctgggcagaggaagaaggtgagcgctat
aattttgagcacttcgtggctcaggtgcctactctcagtgagcacctggacctgcagctg
cgccttgccctttccgatccccgtgatctcaagataggggagtttttgatcggcaacatc
aacgaccgcggctatctgcagatcagcctggaagaggtggaaagaacatacggttatccc
gttcgggagaccgagcgcattctcaagattattcagagcttcgatccgcctggcgtgggg
gcccgggacctgtctgaatgccttttgattcaacttgaacagcgcggctggcgaacgccc
gccttggaaaagctggttcgcttctatttaggcgacctcgccaacggtaatctgctgaag
atcgccgcggccctggatctgccggttcaggacgtgcagcacatggccgatctgattaaa
accctcgatccgataccgggacggaatttttcccggcccggggagaatcgctacatcgcc
ccggatgtggttgtggagaaattcgatgacgaatatataatcctggtcaacgacatctcc
gtcccgcgcttgatgatcaataaaacctatcagagcctgttgaaccagcaggaatcgtgc
gacccggggacggcccagtttattcagaacaagctgaagtcggccatctggctgatacgc
agcattgagcagaggcggctgacgctctaccgggtagtcagctgtatcgtggaattccag
aaggagtttctggataaaggggtgaaacacctcaagcccttaaacctgaagcagattgca
gatgctgccgggctgcatgagtctaccgtcagcagggcgatcgccaataaatacattcag
accccccaggggctttttgagctgaaattcttcttcaccagcggggtggagaacgtcctt
gccggtaagatggtggcggcggagagcatcaagcaggttttgaaagaactgatcgcaggg
gaggatccgtgccgtccgtacagcgaccagcagctctgtgagctgctgcaggccaagggt
atcaatatagcgcggcgcacggtggcgaaataccggcaggagatcggaatcccccctgtg
cggcagcggaagcgctatcgataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (23)   

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