GenomeNet

Database: UniProt/TrEMBL
Entry: D5BKQ2_ZUNPS
LinkDB: D5BKQ2_ZUNPS
Original site: D5BKQ2_ZUNPS 
ID   D5BKQ2_ZUNPS            Unreviewed;       811 AA.
AC   D5BKQ2;
DT   15-JUN-2010, integrated into UniProtKB/TrEMBL.
DT   15-JUN-2010, sequence version 1.
DT   20-JUN-2018, entry version 46.
DE   SubName: Full=ATP-dependent DNA ligase family protein {ECO:0000313|EMBL:ADF53964.1};
GN   OrderedLocusNames=ZPR_3654 {ECO:0000313|EMBL:ADF53964.1};
OS   Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87).
OC   Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales;
OC   Flavobacteriaceae; Zunongwangia.
OX   NCBI_TaxID=655815 {ECO:0000313|EMBL:ADF53964.1, ECO:0000313|Proteomes:UP000001654};
RN   [1] {ECO:0000313|EMBL:ADF53964.1, ECO:0000313|Proteomes:UP000001654}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=DSM 18752 / CCTCC AB 206139 / SM-A87
RC   {ECO:0000313|Proteomes:UP000001654};
RX   PubMed=20398413; DOI=10.1186/1471-2164-11-247;
RA   Qin Q.L., Zhang X.Y., Wang X.M., Liu G.M., Chen X.L., Xie B.B.,
RA   Dang H.Y., Zhou B.C., Yu J., Zhang Y.Z.;
RT   "The complete genome of Zunongwangia profunda SM-A87 reveals its
RT   adaptation to the deep-sea environment and ecological role in
RT   sedimentary organic nitrogen degradation.";
RL   BMC Genomics 11:247-247(2010).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; CP001650; ADF53964.1; -; Genomic_DNA.
DR   RefSeq; WP_013073048.1; NC_014041.1.
DR   ProteinModelPortal; D5BKQ2; -.
DR   STRING; 655815.ZPR_3654; -.
DR   EnsemblBacteria; ADF53964; ADF53964; ZPR_3654.
DR   KEGG; zpr:ZPR_3654; -.
DR   eggNOG; ENOG4105DQE; Bacteria.
DR   eggNOG; COG1793; LUCA.
DR   eggNOG; COG3285; LUCA.
DR   HOGENOM; HOG000222509; -.
DR   KO; K01971; -.
DR   OMA; AMMVEDH; -.
DR   OrthoDB; POG091H0AZ9; -.
DR   BioCyc; ZPRO655815:G1GF6-3483-MONOMER; -.
DR   Proteomes; UP000001654; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR014146; LigD_ligase_dom.
DR   InterPro; IPR014144; LigD_PE_domain.
DR   InterPro; IPR014145; LigD_pol_dom.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR014143; NHEJ_ligase_prk.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF13298; LigD_N; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   TIGRFAMs; TIGR02777; LigD_PE_dom; 1.
DR   TIGRFAMs; TIGR02778; ligD_pol; 1.
DR   TIGRFAMs; TIGR02779; NHEJ_ligase_lig; 1.
DR   TIGRFAMs; TIGR02776; NHEJ_ligase_prk; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000001654};
KW   Ligase {ECO:0000313|EMBL:ADF53964.1}.
FT   DOMAIN      293    404       DNA_LIGASE_A3. {ECO:0000259|PROSITE:
FT                                PS50160}.
SQ   SEQUENCE   811 AA;  92416 MW;  5FBCC856AEAFCC19 CRC64;
     MSLDEYQKKR NFSHTPEPTA EENSENLHRF VIQRHQARRL HYDLRLEIGG TLKSWAVPKG
     PSMNPADKRL AVHTEDHPIT YLKFEGEIPK GNYGAGQMDI WDEGQFSSAL SDKNLLQQYQ
     NGDLKLQFLG KKLKGEFALV NTKQGKDNHW LLIKKKDEFA TDLIYDAEAY AVKTAVAHKK
     GKAPKVRKLK PEDTVKPMLA STAKEIFNHP DWIYELKWDG YRLMAHVDDG KVRIYSRNGI
     NYNSKFPKLV KDLEQIDHQV ILDGEVVIVD KNGLPDFQAL QNYHSKTPGT LRFYVFDMLF
     LNGHSMLELP LKDRKSLIPE VLEGLDHTFY CDHIEGMGMT FYKKAIDSGM EGVIAKKNDS
     TYALGYRTES WLKIKAVESE EAIICGYTDS KGAVFGSLIL GMYKEGELTY VGNCGSGFSN
     DQQKELLGKM ESLAMESSPF AKKINLKGKT PNWIHPELIC EVKFSEWTKA GALRHPVFKG
     LRNDKTALEV QSEVQIKTPE PPDVSGQATS NSGNLDIEGI SVPFTNLGKM YWPKEKIRKY
     DLIEYYLQVS DTMLPYLLDR PQNLHRHPNG IQQKGFYQKD NESLPDWIHT TTIYSESANK
     KIEYMLCQNE ATLLYMVNLG CIEINPWHSK IQDLDRPDYG VIDLDPSTHN TFEEVIETAQ
     VVKEVLDLAK IEGYCKTSGS RGLHIYIPFA GIYSYKEGRD FIKLLCYFVQ DKLPELTSME
     RAVKARKGKI YLDYLQNRRG QTIAAPYAVR PRKGATVSTP LKWDEVKSGL KITDFNIFNV
     PHRLSEEGDL FSSLLSKPID MEKAIGNLNA E
//
DBGET integrated database retrieval system