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Database: UniProt/TrEMBL
Entry: G0IY51_CYCMS
LinkDB: G0IY51_CYCMS
Original site: G0IY51_CYCMS 
ID   G0IY51_CYCMS            Unreviewed;       808 AA.
AC   G0IY51;
DT   19-OCT-2011, integrated into UniProtKB/TrEMBL.
DT   19-OCT-2011, sequence version 1.
DT   07-JUN-2017, entry version 30.
DE   SubName: Full=DNA ligase D {ECO:0000313|EMBL:AEL24955.1};
GN   OrderedLocusNames=Cycma_1183 {ECO:0000313|EMBL:AEL24955.1};
OS   Cyclobacterium marinum (strain ATCC 25205 / DSM 745) (Flectobacillus
OS   marinus).
OC   Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae;
OC   Cyclobacterium.
OX   NCBI_TaxID=880070 {ECO:0000313|EMBL:AEL24955.1, ECO:0000313|Proteomes:UP000001635};
RN   [1] {ECO:0000313|Proteomes:UP000001635}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 25205 / DSM 745 {ECO:0000313|Proteomes:UP000001635};
RA   Lucas S., Han J., Lapidus A., Bruce D., Goodwin L., Pitluck S.,
RA   Peters L., Kyrpides N., Mavromatis K., Ivanova N., Ovchinnikova G.,
RA   Chertkov O., Detter J.C., Tapia R., Han C., Land M., Hauser L.,
RA   Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Tindall B.,
RA   Schuetze A., Brambilla E., Klenk H.-P., Eisen J.A.;
RT   "The complete genome of Cyclobacterium marinum DSM 745.";
RL   Submitted (JUL-2011) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP002955; AEL24955.1; -; Genomic_DNA.
DR   RefSeq; WP_014019252.1; NC_015914.1.
DR   ProteinModelPortal; G0IY51; -.
DR   STRING; 880070.Cycma_1183; -.
DR   EnsemblBacteria; AEL24955; AEL24955; Cycma_1183.
DR   KEGG; cmr:Cycma_1183; -.
DR   eggNOG; ENOG4105DQE; Bacteria.
DR   eggNOG; COG1793; LUCA.
DR   eggNOG; COG3285; LUCA.
DR   KO; K01971; -.
DR   OMA; AMMVEDH; -.
DR   OrthoDB; POG091H0AZ9; -.
DR   BioCyc; CMAR880070:GHDK-1191-MONOMER; -.
DR   Proteomes; UP000001635; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR014146; LigD_ligase_dom.
DR   InterPro; IPR014144; LigD_PE_domain.
DR   InterPro; IPR014145; LigD_pol_dom.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR014143; NHEJ_ligase_prk.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF13298; LigD_N; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   TIGRFAMs; TIGR02777; LigD_PE_dom; 1.
DR   TIGRFAMs; TIGR02778; ligD_pol; 1.
DR   TIGRFAMs; TIGR02779; NHEJ_ligase_lig; 1.
DR   TIGRFAMs; TIGR02776; NHEJ_ligase_prk; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000001635};
KW   Ligase {ECO:0000313|EMBL:AEL24955.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000001635}.
FT   DOMAIN      283    375       DNA_LIGASE_A3. {ECO:0000259|PROSITE:
FT                                PS50160}.
SQ   SEQUENCE   808 AA;  93174 MW;  CA01958AEA058DC1 CRC64;
     MGLKAYREKR SFNDTSEPKG VVENTHQFRF VVQRHRARKL HYDLRLEIDG VLKSWAVPKG
     PSMNPRDKRL AVQTEDHPVA YLSFEGLIPK GNYGAGKMTI WDEGNFQSLQ QPNDLCKDHK
     KGKLKIIFHG SKLKGIFTLV RSSSMNKKDQ WLLIKHDDAF ATDLDYDAED FNEEAFSSGP
     GENSKKLDLK SLIKPMLASP GTKIFNDKDW IYELKYDGYR AIANIRNDKV ELYSRNGISL
     NEKFQPIYKE LKKIEHTAIL DGEIVVLDKN GLPQFNSLQN YDKQSTKGRL VYYVFDLLHL
     NDHDTLGLPL IDRKQLLKDL IPENTHIRYC DHVETMGITV YDRAIDMGME GVIAKKANST
     YDLNSRSANW LKFKKIENTE TIICGYTLSN KKSRKFGSLI LGMVEEGQLT YVGTCGTGFS
     EEQLTEMYFK FEVLKTKNPV FNIRKHLKGR EAVWLIPKLI CEVKFSEWTS SKVMRHPVFL
     RLREDKNLNF EPNQIPLKKT ASKKTGEDAF SLKVDDIMVS ITHPEKSYWP ESGYTKYDLL
     DYYIQMSDLI LPYLKDRPES LHRHPSGIHG ESFYQKDHEH LPEWIDTHGI HSSSSDKEIN
     YLLCQQKATL LYLNNLGCIE LHPWHSTIYQ LDYPDYAILD LDPSEENTFE EVMETALATK
     EILKQANIKG YCKTSGSSGL HIYLPMGGKY TYEEARNFTK LLCYFIQEKL PKLTTLERSL
     KKRGPKIYLD YLQNRKGQTI VAPYSLRPRL HAPVSMPLLW SELKPGLKIT DFTIKTVPKL
     MEDRKDSFKP VLGKAIDMSS AIAHLNNL
//
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