GenomeNet

Database: UniProt/TrEMBL
Entry: G9ABJ8_RHIFH
LinkDB: G9ABJ8_RHIFH
Original site: G9ABJ8_RHIFH 
ID   G9ABJ8_RHIFH            Unreviewed;       865 AA.
AC   G9ABJ8;
DT   22-FEB-2012, integrated into UniProtKB/TrEMBL.
DT   22-FEB-2012, sequence version 1.
DT   28-FEB-2018, entry version 36.
DE   SubName: Full=Putative ATP-dependent DNA ligase protein {ECO:0000313|EMBL:CCE97289.1};
GN   OrderedLocusNames=SFHH103_02797 {ECO:0000313|EMBL:CCE97289.1};
OS   Rhizobium fredii (strain HH103) (Sinorhizobium fredii).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales;
OC   Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.
OX   NCBI_TaxID=1117943 {ECO:0000313|EMBL:CCE97289.1, ECO:0000313|Proteomes:UP000007735};
RN   [1] {ECO:0000313|EMBL:CCE97289.1, ECO:0000313|Proteomes:UP000007735}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=HH103 {ECO:0000313|EMBL:CCE97289.1,
RC   ECO:0000313|Proteomes:UP000007735};
RX   PubMed=22374952; DOI=10.1128/JB.06729-11;
RA   Weidner S., Becker A., Bonilla I., Jaenicke S., Lloret J.,
RA   Margaret I., Puhler A., Ruiz-Sainz J.E., Schneiker-Bekel S.,
RA   Szczepanowski R., Vinardell J.M., Zehner S., Gottfert M.;
RT   "Genome sequence of the soybean symbiont Sinorhizobium fredii HH103.";
RL   J. Bacteriol. 194:1617-1618(2012).
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; HE616890; CCE97289.1; -; Genomic_DNA.
DR   RefSeq; WP_014329710.1; NC_016812.1.
DR   STRING; 1117943.SFHH103_02797; -.
DR   GeneID; 34336079; -.
DR   KEGG; sfh:SFHH103_02797; -.
DR   PATRIC; fig|380.5.peg.2971; -.
DR   eggNOG; ENOG4105DQE; Bacteria.
DR   eggNOG; COG3285; LUCA.
DR   KO; K01971; -.
DR   OMA; QEFVICG; -.
DR   OrthoDB; POG091H0AZ9; -.
DR   BioCyc; SFRE1117943:GJT5-2834-MONOMER; -.
DR   Proteomes; UP000007735; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   CDD; cd04862; PaeLigD_Pol_like; 1.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR014146; LigD_ligase_dom.
DR   InterPro; IPR014144; LigD_PE_domain.
DR   InterPro; IPR014145; LigD_pol_dom.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR014143; NHEJ_ligase_prk.
DR   InterPro; IPR033651; PaeLigD_Pol-like.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF13298; LigD_N; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   TIGRFAMs; TIGR02777; LigD_PE_dom; 1.
DR   TIGRFAMs; TIGR02778; ligD_pol; 1.
DR   TIGRFAMs; TIGR02779; NHEJ_ligase_lig; 1.
DR   TIGRFAMs; TIGR02776; NHEJ_ligase_prk; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000007735};
KW   Ligase {ECO:0000313|EMBL:CCE97289.1}.
FT   DOMAIN      328    452       DNA_LIGASE_A3. {ECO:0000259|PROSITE:
FT                                PS50160}.
SQ   SEQUENCE   865 AA;  95143 MW;  C79B5A6E22EEA225 CRC64;
     MAARSEPLSE YNRRRDFTKT REPKGAVART HAGRKRFLVQ KHDATRLHYD FRLEWEGVLK
     SWAVTRGPSL NPEDKRLAIR TEDHPLAYGD FEGTIPEGEY GGGTVMLWDT GWWEPEGDPS
     KGLKKGKLSF KLHGSRMKGG WALVRMRPRD GEKRENWLLV KETDEIASED GENLIKENIT
     SVVTGRAMDE IAGGKGEKRA RFWHSNKSTA ANLKAGAIAE NDNARRRSAR RPSGKLPAFK
     APQLATLVTK APAGETWLNE AKFDGYRLLC AIGGGTVRCY TRNGLDWTEK FPAIAAALAE
     LDCKSALIDG EVVALSDAGP SFSALQKALR TGASTRLYAF DLIELDGKDL SREPLIERKE
     KLKLLLGSLG TTATVQYSEH VEGNGEHVLA AICKAGQEGI IAKEAKAPYR SGRTRSWLKV
     KCTRRQEFVI GGYTPSSKKG RPFASILVGT FEGGKLIYRG GVGTGFGEKV MQELAAAFAS
     RSRETPPFDS VPRERMRNAV WLKPDLVAEV DFAEFTADGH VRHGSFEGMR EDKEAKAVKL
     ETAKPTGAAP GAAKSKPSAK TSKASSAKGD TDVLGIHISH PDRILFQGQG ITKIDLARYY
     AVVAERMLPF TADHPVSLVR CPQGGQRHCF YQKHASDGFP DEIKEVPIEE SSGSTENYMY
     VRHAKGLVAA VQMGTLEFHI WGATIDKLET PDRLVFDFDP DPSVDFTTVK NAAVALRDEL
     ADIGLQSFAL VTGGKGVHVV VPLVRRASWD DAKSFAKAVA QNIADRDPDH FVATMSKAKR
     KGRIFIDWLR NERGATAIAP YSSRAREGGP IATPVGWDEM ERLSGANTFH IGDILERIEA
     DTDPWRDIGK VKQSLTKKMM DSVAK
//
DBGET integrated database retrieval system