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Database: UniProt/TrEMBL
Entry: V4LG43_EUTSA
LinkDB: V4LG43_EUTSA
Original site: V4LG43_EUTSA 
ID   V4LG43_EUTSA            Unreviewed;      1220 AA.
AC   V4LG43;
DT   22-JAN-2014, integrated into UniProtKB/TrEMBL.
DT   22-JAN-2014, sequence version 1.
DT   20-DEC-2017, entry version 24.
DE   RecName: Full=DNA ligase {ECO:0000256|RuleBase:RU000617};
DE            EC=6.5.1.1 {ECO:0000256|RuleBase:RU000617};
GN   ORFNames=EUTSA_v10012474mg {ECO:0000313|EMBL:ESQ42689.1};
OS   Eutrema salsugineum (Saltwater cress) (Sisymbrium salsugineum).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
OC   Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae;
OC   Eutrema.
OX   NCBI_TaxID=72664 {ECO:0000313|EMBL:ESQ42689.1, ECO:0000313|Proteomes:UP000030689};
RN   [1] {ECO:0000313|EMBL:ESQ42689.1, ECO:0000313|Proteomes:UP000030689}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=23518688; DOI=10.3389/fpls.2013.00046;
RA   Yang R., Jarvis D.E., Chen H., Beilstein M.A., Grimwood J.,
RA   Jenkins J., Shu S., Prochnik S., Xin M., Ma C., Schmutz J., Wing R.A.,
RA   Mitchell-Olds T., Schumaker K.S., Wang X.;
RT   "The Reference Genome of the Halophytic Plant Eutrema salsugineum.";
RL   Front. Plant Sci. 4:46-46(2013).
CC   -!- CATALYTIC ACTIVITY: ATP + (deoxyribonucleotide)(n)-3'-hydroxyl +
CC       5'-phospho-(deoxyribonucleotide)(m) = (deoxyribonucleotide)(n+m) +
CC       AMP + diphosphate. {ECO:0000256|RuleBase:RU000617}.
CC   -!- SIMILARITY: Belongs to the ATP-dependent DNA ligase family.
CC       {ECO:0000256|RuleBase:RU004196}.
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DR   EMBL; KI517464; ESQ42689.1; -; Genomic_DNA.
DR   RefSeq; XP_006401236.1; XM_006401173.1.
DR   GeneID; 18019386; -.
DR   KEGG; eus:EUTSA_v10012474mg; -.
DR   KO; K10777; -.
DR   Proteomes; UP000030689; Unassembled WGS sequence.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:UniProtKB-EC.
DR   GO; GO:0071897; P:DNA biosynthetic process; IEA:InterPro.
DR   GO; GO:0051103; P:DNA ligation involved in DNA repair; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
DR   GO; GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
DR   CDD; cd00027; BRCT; 1.
DR   Gene3D; 1.10.3260.10; -; 1.
DR   Gene3D; 3.40.50.10190; -; 2.
DR   InterPro; IPR001357; BRCT_dom.
DR   InterPro; IPR036420; BRCT_dom_sf.
DR   InterPro; IPR000977; DNA_ligase_ATP-dep.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR016059; DNA_ligase_ATP-dep_CS.
DR   InterPro; IPR012308; DNA_ligase_ATP-dep_N.
DR   InterPro; IPR036599; DNA_ligase_N_sf.
DR   InterPro; IPR029710; LIG4.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   PANTHER; PTHR10459:SF7; PTHR10459:SF7; 2.
DR   Pfam; PF16589; BRCT_2; 1.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF04675; DNA_ligase_A_N; 1.
DR   SMART; SM00292; BRCT; 2.
DR   SUPFAM; SSF117018; SSF117018; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   SUPFAM; SSF52113; SSF52113; 2.
DR   TIGRFAMs; TIGR00574; dnl1; 1.
DR   PROSITE; PS50172; BRCT; 2.
DR   PROSITE; PS00697; DNA_LIGASE_A1; 1.
DR   PROSITE; PS00333; DNA_LIGASE_A2; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   3: Inferred from homology;
KW   ATP-binding {ECO:0000256|RuleBase:RU000617};
KW   Coiled coil {ECO:0000256|SAM:Coils};
KW   Complete proteome {ECO:0000313|Proteomes:UP000030689};
KW   DNA damage {ECO:0000256|RuleBase:RU000617};
KW   DNA recombination {ECO:0000256|RuleBase:RU000617};
KW   DNA repair {ECO:0000256|RuleBase:RU000617};
KW   DNA replication {ECO:0000256|RuleBase:RU000617};
KW   Ligase {ECO:0000256|RuleBase:RU000617};
KW   Nucleotide-binding {ECO:0000256|RuleBase:RU000617};
KW   Reference proteome {ECO:0000313|Proteomes:UP000030689}.
FT   DOMAIN      336    479       DNA_LIGASE_A3. {ECO:0000259|PROSITE:
FT                                PS50160}.
FT   DOMAIN      651    739       BRCT. {ECO:0000259|PROSITE:PS50172}.
FT   DOMAIN      839    910       BRCT. {ECO:0000259|PROSITE:PS50172}.
FT   COILED      127    147       {ECO:0000256|SAM:Coils}.
FT   COILED     1109   1129       {ECO:0000256|SAM:Coils}.
SQ   SEQUENCE   1220 AA;  137805 MW;  BACED6BE946C890D CRC64;
     MTEEIKFSVL VSLFNWIQKS KTSSQKRSKF RKFLDTYCKP SDYFVAVRLI IPALDRERGS
     YGLKESVLAT CLIDALGVSR DAPDAVRLLN WRKGGTAKAG ANAGNFSLIA AEVLQRRQGM
     ASGGLTIKEL NDLLDRLASS ENRAEKTSLL STLIQKTNAQ EMKWVIRIIL KDLKLGMSEK
     SIFQEFHPDA EDLFNVTCDL KLVCEKLRDR HQRHKRQDIE VGKAVRPQLA MRSGDVNAAW
     KKLHGKDVVA ECKFDGDRIQ IHKNGTEIHY FSRNFLDHSE YAHAMSDLIV QNILADKCIL
     DGEMLVWDTS LNRFAEFGSN QEIAKAAREG LDSHRQLCYV AFDVLYVGDT SVIHQSLKER
     HELLRKVVKP LKGRLEVLVP EGGLNVHRPS GEPSWSIVAH SAADVERFFK ETVENRDEGV
     VLKDLGSKWE PGDRSGKWMK LKPEYIRAGS DLDVLIIGGY YGSGRRGGEV AQFLVALADR
     AEANVYPRRF MSFCRVGTGL SDDELDTVVS KLKPYFKKNE HPKKAPPSFY QVTNHSKERP
     DVWIESPEKS IILSITSDIR TIRSEVFVAP YSLRFPRIDK VRYDKPWHEC LDVQAFVELV
     NSSNGTTQKQ KESENTQDNP KAIKSSRRGE KKNVSLVPSQ FTQTDVSDIK GKTSIFSNMI
     FYFVNLPRSH SLDTFHKMVV ENGGKFSMNL NNSVTHCIAA ESSGIKYQAS KRQRDVIHFS
     WFLDCCSRNN LLPLQPKYFL HLTDASRTKL QDEIDEFSDS YFWDLDLEGL KQVLSNAKQS
     EDSKSIEYYK KKLCPEKRWS CFFGCCIYFH PYSQTLSTEE EALLGIMAKR LALEVLMSGG
     KVSNNLTHAS HLVVLAIAED SLDFTSVSKS SFSEMEKRRL LKRGLHVVSA HWLEDSLQRE
     QKLCEDVYTL RPKHMEESDT EESDNSEHDT TEEASCGNAQ TEEPASSKTV RGRSNARASS
     KRGRSSTNSL QRVQRRRGKQ PSKIGGDETE EGDTSEEKVS TRLSDIAEGT DSLGEAQRNS
     RRGKSAKRGK SRVGQTQRVQ RSRRGKKPSK IGGDESEEDD DFDDRKHEYA EAEESNAAGR
     SVEDNNEETR EPDVAKYTES LQRDNTVAVE EASQDSRNAN TEMDTKEKLQ MHEDPVQAML
     MDMIPSLSLK NTETSNRTTG ESSRLANVSG ECESSEKRKL DGETDATSVN AEEDADAIPP
     PVKKKKVSYR DIAGDLLKDW
//
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