GenomeNet

Database: UniProt/TrEMBL
Entry: V9V1K1_9PSED
LinkDB: V9V1K1_9PSED
Original site: V9V1K1_9PSED 
ID   V9V1K1_9PSED            Unreviewed;       830 AA.
AC   V9V1K1;
DT   19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT   19-MAR-2014, sequence version 1.
DT   07-JUN-2017, entry version 24.
DE   SubName: Full=ATP-dependent DNA ligase {ECO:0000313|EMBL:AHC88178.1};
DE            EC=6.5.1.1 {ECO:0000313|EMBL:AHC88178.1};
GN   Name=ligD {ECO:0000313|EMBL:AHC88178.1};
GN   ORFNames=X970_12560 {ECO:0000313|EMBL:AHC88178.1};
OS   Pseudomonas monteilii SB3101.
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas.
OX   NCBI_TaxID=1435058 {ECO:0000313|EMBL:AHC88178.1, ECO:0000313|Proteomes:UP000018660};
RN   [1] {ECO:0000313|EMBL:AHC88178.1, ECO:0000313|Proteomes:UP000018660}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=SB3101 {ECO:0000313|EMBL:AHC88178.1,
RC   ECO:0000313|Proteomes:UP000018660};
RA   Dueholm M.S., Albertsen M., D'Imperio S., Tale V.P., Lewis D.,
RA   Nilsen P.H., Nielsen J.L.;
RT   "Complete Genomes of Pseudomonas monteilii SB3078 and SB3101, two
RT   Benzene, Toluene and Ethylbenzene Degrading Bacteria used for
RT   Bioaugmentation.";
RL   Submitted (DEC-2013) to the EMBL/GenBank/DDBJ databases.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   -----------------------------------------------------------------------
DR   EMBL; CP006979; AHC88178.1; -; Genomic_DNA.
DR   RefSeq; WP_024087138.1; NC_023076.1.
DR   EnsemblBacteria; AHC88178; AHC88178; X970_12560.
DR   KEGG; pmot:X970_12560; -.
DR   PATRIC; fig|1435058.3.peg.2436; -.
DR   KO; K01971; -.
DR   Proteomes; UP000018660; Chromosome.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:UniProtKB-EC.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   CDD; cd04862; PaeLigD_Pol_like; 1.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR014146; LigD_ligase_dom.
DR   InterPro; IPR014144; LigD_PE_domain.
DR   InterPro; IPR014145; LigD_pol_dom.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR014143; NHEJ_ligase_prk.
DR   InterPro; IPR033651; PaeLigD_Pol-like.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF13298; LigD_N; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   TIGRFAMs; TIGR02777; LigD_PE_dom; 1.
DR   TIGRFAMs; TIGR02778; ligD_pol; 1.
DR   TIGRFAMs; TIGR02779; NHEJ_ligase_lig; 1.
DR   TIGRFAMs; TIGR02776; NHEJ_ligase_prk; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000018660};
KW   Ligase {ECO:0000313|EMBL:AHC88178.1}.
FT   DOMAIN      305    397       DNA_LIGASE_A3. {ECO:0000259|PROSITE:
FT                                PS50160}.
SQ   SEQUENCE   830 AA;  92570 MW;  158470B4A1307EA6 CRC64;
     MAKPLQEYAR KRDFNATPEP SGKRSRGKRA HALQFCIQKH DASHLHYDFR LELDGTLKSW
     AIPKGPSLDP KVRRLAVHVE DHPLDYADFE GHIPEGHYGA GDVIVWDRGI WEPEGDAHEA
     YAKGKLRFRL QGEKLGGVWN LFRTHLAGKK EQWMLVKSHD SQARSEADYS IVDAQPDSVL
     SDRTLVPRKP TAKKAAAPRR KAASKGRKVP LPAQLQPQLA TLVDSPPSGD WRYEVKFDGY
     RILARIDGDD VRLFTRNGHD WSGKMPRQVA ALRALGLDSA WLDGEVVVAG ENGAADFQAL
     QNAFDTEHDE HITYYLFDLP FLGSQDLRQL PLQDRRDTLQ RLLEHNESDV LKYSADFDQP
     VESLLDSACR LQLEGLIGKR VDSPYSGRRS PDWIKLKCKQ RQEFVIVGYT DPKGSRSGFG
     ALLLALHDND SGELRYAGKV GTGFSTTTLA SIHARLKPLE TAKPALPKPP TGAEARGVHW
     LKPQLLAEVA YAQMTRDGIV RHSVFHGLRD DKPATAIDLE RSMPAKTLPK RKQAKAPEAL
     GELRLTHPER VVDATSGVTK REVAEYYAAV SQWILPQLKN RPVALVRAPD GLAGELFFQK
     NAGQLHLPNV LSYDKAEAGQ AAMVINRADT LIGAVQMNML ELHTWNATDK DFDKPDRFVL
     DLDPDPALPW KAMLEATQLA LTLLDELGLK VFLKTSGGKG MHLVVPLTRR ASWDEVKAFS
     HGIVDYLARL FPDRLSAVSG PKNRIGRIFI DYLRNGKGAT TACAYTLRAR EGLPVSVPIW
     REELPQLKGA NQWNIGNVLE RLGDVDDPWA DYGKTRQSIT VGMRKQLGLA
//
DBGET integrated database retrieval system