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Database: UniProt/TrEMBL
Entry: W0RSS2_9BACT
LinkDB: W0RSS2_9BACT
Original site: W0RSS2_9BACT 
ID   W0RSS2_9BACT            Unreviewed;       879 AA.
AC   W0RSS2;
DT   19-MAR-2014, integrated into UniProtKB/TrEMBL.
DT   19-MAR-2014, sequence version 1.
DT   27-SEP-2017, entry version 15.
DE   SubName: Full=DNA ligase D {ECO:0000313|EMBL:AHG93522.1};
GN   ORFNames=J421_5987 {ECO:0000313|EMBL:AHG93522.1};
OS   Gemmatirosa kalamazoonesis.
OG   Plasmid 2 {ECO:0000313|EMBL:AHG93522.1,
OG   ECO:0000313|Proteomes:UP000019151}.
OC   Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae;
OC   Gemmatirosa.
OX   NCBI_TaxID=861299 {ECO:0000313|EMBL:AHG93522.1, ECO:0000313|Proteomes:UP000019151};
RN   [1] {ECO:0000313|EMBL:AHG93522.1, ECO:0000313|Proteomes:UP000019151}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=KBS708 {ECO:0000313|EMBL:AHG93522.1,
RC   ECO:0000313|Proteomes:UP000019151};
RC   PLASMID=Plasmid 2 {ECO:0000313|Proteomes:UP000019151};
RX   PubMed=24699952;
RA   Debruyn J.M., Radosevich M., Wommack K.E., Polson S.W., Hauser L.J.,
RA   Fawaz M.N., Korlach J., Tsai Y.C.;
RT   "Genome Sequence and Methylome of Soil Bacterium Gemmatirosa
RT   kalamazoonensis KBS708T, a Member of the Rarely Cultivated
RT   Gemmatimonadetes Phylum.";
RL   Genome Announc. 2:e00226-14(2014).
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DR   EMBL; CP007130; AHG93522.1; -; Genomic_DNA.
DR   EnsemblBacteria; AHG93522; AHG93522; J421_5987.
DR   KEGG; gba:J421_5987; -.
DR   PATRIC; fig|861299.3.peg.6040; -.
DR   KO; K01971; -.
DR   Proteomes; UP000019151; Plasmid 2.
DR   GO; GO:0005524; F:ATP binding; IEA:InterPro.
DR   GO; GO:0003910; F:DNA ligase (ATP) activity; IEA:InterPro.
DR   GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR   GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR   InterPro; IPR012309; DNA_ligase_ATP-dep_C.
DR   InterPro; IPR012310; DNA_ligase_ATP-dep_cent.
DR   InterPro; IPR014146; LigD_ligase_dom.
DR   InterPro; IPR014144; LigD_PE_domain.
DR   InterPro; IPR014145; LigD_pol_dom.
DR   InterPro; IPR012340; NA-bd_OB-fold.
DR   InterPro; IPR014143; NHEJ_ligase_prk.
DR   Pfam; PF04679; DNA_ligase_A_C; 1.
DR   Pfam; PF01068; DNA_ligase_A_M; 1.
DR   Pfam; PF13298; LigD_N; 1.
DR   SUPFAM; SSF50249; SSF50249; 1.
DR   TIGRFAMs; TIGR02777; LigD_PE_dom; 1.
DR   TIGRFAMs; TIGR02778; ligD_pol; 1.
DR   TIGRFAMs; TIGR02779; NHEJ_ligase_lig; 1.
DR   TIGRFAMs; TIGR02776; NHEJ_ligase_prk; 1.
DR   PROSITE; PS50160; DNA_LIGASE_A3; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000019151};
KW   Ligase {ECO:0000313|EMBL:AHG93522.1};
KW   Plasmid {ECO:0000313|EMBL:AHG93522.1};
KW   Reference proteome {ECO:0000313|Proteomes:UP000019151}.
FT   DOMAIN      318    408       DNA_LIGASE_A3. {ECO:0000259|PROSITE:
FT                                PS50160}.
SQ   SEQUENCE   879 AA;  97979 MW;  76DBCF1453CE4B05 CRC64;
     MTADGNEQTP TSDHLSRYRA KRSADTTPEP MGSVSPVLGR LFVVHKHAAR QLHFDLRLEM
     DGVLRSWAVP KGPSYDMNDR RLAVKVEDHP IEYGDFEGII PAGNYGAGGI IVWDRGEWVP
     LEDWREGLEK GKLLFELRGH KLHGKWTLVK IKKSDRDWLF IKERDAWVRT PGDDFPETSV
     LSGLTVEEVK AGKSPTGRVR AALMEAGAPA TRVDPRAVEV MLAEPADEAF TRAGWLFEPK
     LDGYRLLAAK TRGDVLLLTR NGNDYTNVFP EIARAVRAIP CHECIVDGEV VVLDPRGMPN
     FALMQRRGQL TSPLDIRRMA VELPATYYAF DLLAFEEFDV RPLPLVRRKA LLAELVPSLG
     VLRSVDHHER EGERFLQHAS AIGLEGMIAK RADAPYRGGR TDAWLKIKSA RTGDFAIVGF
     TAPNGGRRHF GALQLADMVG GRLVYAGRVG TGFDDAQLAR LGAMLQPVIR SDAPCDGPVA
     APGAEPAAAI PETGTTTWVD PVHVCEVRYA EWTPDGLLRH ASFLRMRTDK HPRDCDRQRW
     PAHEPEPVPM TVAVDVADAA DAVEESEAAP VAPEPPRPVE KTFAFSNLSK RYWPAEGYTK
     GDLVEYYRAI APRMLPYLSD RPVVLTRFPD GIEGKSFYQK DAPEFTPPWV RTIPIWSEES
     QREIRYFVCN DVETLLYLAN MASIPLHIWA SRVGSLEQTD WCVIDLDPKE APFSDVVRTA
     LVLREICESI GLPSYVKTTG KTGLHILVPL GRQCTYAQSR MLGELLARVV LARVRDIATI
     TRHVTKRGDK VYLDYLQNRH GQTIVAPFSV RPLPGATVSM PLRWEEVNAS LDPKAFTIRT
     ALDRMDRLGV DPMLDVLAES PDLQLVLQRL AQVLAADAR
//
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