KEGG   Tardiphaga robiniae: HB776_11365
Entry
HB776_11365       CDS       T06738                                 
Symbol
rnr
Name
(GenBank) ribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
trb  Tardiphaga robiniae
Pathway
trb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:trb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HB776_11365 (rnr)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:trb03019]
    HB776_11365 (rnr)
   03016 Transfer RNA biogenesis [BR:trb03016]
    HB776_11365 (rnr)
Enzymes [BR:trb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     HB776_11365 (rnr)
Messenger RNA biogenesis [BR:trb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     HB776_11365 (rnr)
Transfer RNA biogenesis [BR:trb03016]
 Prokaryotic type
  tRNA degradation factors
   HB776_11365 (rnr)
SSDB
Motif
Pfam: RNB CSD2 S1 RNase_II_C_S1 HTH_Crp_2
Other DBs
NCBI-ProteinID: QND71757
UniProt: A0A7G6TYC5
Position
2386428..2388824
AA seq 798 aa
MNKKRDSSFPTRDAIVAFVRAYPGKIGTREIAREFGLKNAARVELKRMLRELADEGAIAK
KGRSVREPAALPPTVLVDITSRDADGELIATPVEWDEADGTVPKIRIHTPRRPLPGTAAG
VGDRALLRIEKIENEGELASYQGRVVRVLEGARTRLLGIYRALPNGGGRLIPVDKKQAGR
ELNIAASDANGAEDGDLVSVDLIRTRGYGLGSGKVKERLGSLSSEKAVSLIAIHSHDIPQ
AFSRDALKEAEAAQPATLQGREDWRDVPLVTIDPPDAKDHDDAVYAELDSDPNNAGGYIV
TVAIADVAFYVRPGSALDRDALIRGNSVYFPDRVVPMLPERISNDLCSLVPGEPRGALAV
RMVIGVDGRKKSHTFHRILMRSAAKLNYAQAQAAIDGHPDDTTGPLLEPILKPLYAAYAQ
VKLARDEREPLDLDIPERKILLKKDGTVDRVIVPERLDAHKLIEEFMILANVAAAETLEK
KALPLIYRVHDEPSVEKVHNLQEFLKTLDMPFAKAGALRPSVFNRVLSQVKGQDSEPLVN
EVVLRSQAQAEYAAENYGHFGLNLRRYAHFTSPIRRYADLIVHRALIRALGLGEGALPET
ETVETLSEISAQISATERRAMKAERETSDRLIAHFLADKIGATFRGRISGVTRAGLFVRL
TETGADGLIPIRTLGTEYFNYDEARHALVGTRSGAMHRLGDVVDVRLVEAAPVAGALRFE
MLSEGNTAPRNRRREHARSNDAADRPRHPGAKPSGPTKFKSSKKVKAPKKAKPGRNARQA
AKADKARAGGNPGKPKKG
NT seq 2397 nt   +upstreamnt  +downstreamnt
gtgaacaagaaacgtgacagcagctttccaaccagggatgccatcgtcgcgttcgttcgc
gcgtatcccggcaagatcggcacccgcgagatcgcgcgtgaattcggactgaagaacgcc
gcccgtgtcgagctcaagcgcatgctgcgcgaactcgccgacgaaggcgccatcgccaaa
aagggccgcagcgtgcgcgagcccgcagcgctgccaccgacagtgctggtcgacatcacc
tccagggatgccgatggcgagttgatcgccacgcccgtcgaatgggacgaggcagacggc
acggtgccaaaaattcgcattcacacgccgcgccgtcccctgcccggcaccgccgccggc
gtcggtgaccgcgcgctgctgcgtatcgagaagatcgagaacgagggcgaattagccagc
tatcagggccgcgtcgtgcgggtgctcgaaggtgcccgcacgcgcctgctcggcatctat
cgcgcgctgccgaatggcggcggacgattgatcccggtcgacaagaagcaggccgggcgc
gaactcaacatcgccgcgtcagacgccaacggcgccgaggacggcgatctcgtcagtgtc
gatctcattcgcacgcgtggctatggcctcggttccggcaaggtgaaggaacggctcggt
tcgctctcctccgagaaggcggtcagcctgatcgcgatccactcgcacgatatcccgcag
gcgttctcccgcgatgcgctgaaggaagcggaagccgcgcagcctgcgacattgcaagga
cgcgaagactggcgcgacgtgccgctggttaccatcgatccgccggacgccaaggatcat
gacgacgccgtttacgcggagctcgattccgatccgaacaatgcaggtggatacatcgtc
accgtcgccatcgccgatgtcgccttctatgtgcgtcccggctcggcgctcgatcgcgat
gcgctgatccgcggcaactccgtctacttccccgaccgcgtcgtaccgatgctgccggag
cgcatctccaacgacctgtgttcgctggtgccgggcgagccgcgcggcgccctcgccgta
cgcatggtgatcggtgtcgatggccgcaagaagtcacatacgttccatcgcatcctgatg
cgttcggcggccaagctgaattacgcgcaggcgcaggccgccatcgatggccatcccgac
gatactaccggccccctgctcgaaccgatcctgaagccgctttacgctgcctatgcgcag
gtaaagctcgcgcgcgacgaacgcgaaccgctggatctcgacatccccgagcgaaaaatc
ctgctgaagaaggacggcaccgtcgatcgcgtcatcgtaccggagcggctcgacgcgcat
aagctcatcgaagagttcatgatcctggccaacgtcgccgcagccgaaacgcttgaaaag
aaggctctgccgcttatctatcgggtacatgatgagccttcggtggagaaggttcacaac
ctgcaggaattcctcaagaccctcgacatgccgttcgccaaagcgggcgcattgcggcca
tcggtattcaaccgggtgctgtcacaggtcaaaggtcaggattccgaaccgctggtgaac
gaagtggttttgcgctcgcaagcccaggcggaatatgccgccgagaattacggacatttc
ggtctgaacctgcgccgctacgcgcattttacctcgcctatcaggcgatacgcagatctg
atcgtgcatcgcgcactgatccgtgcgctcgggcttggcgaaggcgcactgcccgagacg
gaaaccgtggaaacgctgagcgaaatctcggcgcagatttcggccaccgaacgccgggcc
atgaaggccgagcgcgagacgtccgaccggctgattgcgcattttctggccgacaagatc
ggcgccaccttccggggcaggatctccggcgtcaccagggctggactctttgtccgattg
accgagaccggcgccgatggcctgatcccgatccgcacgttgggcaccgaatacttcaac
tatgacgaagctcgccacgccctcgtcggtacacgcagtggtgccatgcaccggttgggc
gacgtcgtcgatgtccgtctggtcgaggcagcccccgttgcaggtgccttgcggttcgaa
atgctttccgagggcaataccgccccacggaaccgccgacgcgaacatgcccgcagcaat
gacgctgcagaccggccgcgtcatccgggtgccaagccttctggtccgacaaagttcaaa
tcgtcgaagaaggtcaaggcgcccaagaaagccaaacccggtcgcaatgcccggcaggct
gccaaagctgacaaggctcgcgccggtggtaaccccggcaagccgaaaaaggggtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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