KEGG   Tardiphaga robiniae: HB776_25530
Entry
HB776_25530       CDS       T06738                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
trb  Tardiphaga robiniae
Brite
KEGG Orthology (KO) [BR:trb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:trb03021]
    HB776_25530
Transcription machinery [BR:trb03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     HB776_25530
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 UPF0122 MarR Sigma70_ECF HTH_38 HTH_28
Other DBs
NCBI-ProteinID: QND74185
UniProt: A0A7G6U5A3
Position
5328650..5329312
AA seq 220 aa
MTYALQIADAVETMPVQLEAAEDSLMLDACEPAGDSDEELLDRLAANDEMAFRCLVERHI
DRAFGVALRLLGSRADAEDVVQDTMLKVWTHRGQWEHGRAKFSTWLYRVVTNRCIDLHRR
PRTDNVDAVPEPADVKPDAFSTMQRDEVAKLLETAMQRLPEQQRVAVSLSYHENMSNGDI
AEVMNTTVSAVESLLKRGRQQLREILRRHEPDILHSLSDC
NT seq 663 nt   +upstreamnt  +downstreamnt
atgacgtacgcgctccagattgcagacgctgtcgaaacaatgccggtgcagcttgaagct
gcggaggattctctgatgctcgacgcgtgcgagccagcgggcgatagtgacgaagagctg
ctggacagattagccgcaaatgacgagatggcattcagatgtcttgtcgagcgtcatatc
gatcgtgcgtttggcgttgcgcttcggcttctgggcagtcgcgccgatgccgaagatgtg
gtgcaggacacgatgctgaaggtctggacgcatcgcgggcaatgggagcacggccgcgca
aaattctcgacgtggctctaccgggttgtcaccaatcgctgcatcgatctgcatcgtcgg
ccacgcaccgacaatgtcgatgccgtgccggagccagccgacgtcaagcccgatgcgttc
agcacgatgcagcgtgatgaagtggcgaaattgctggagacggcgatgcaacgtctgcct
gagcagcaacgtgtcgcggtgagcctgtcctaccatgaaaacatgagcaacggcgacatc
gccgaagtcatgaacacgactgtgtccgcggtcgagtcgctgctcaagcgcgggcggcag
cagctgcgcgaaattctgcgccgccatgagccagacatcctgcactcgttaagcgattgc
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (14)   

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