KEGG   Trichoderma reesei QM6a: TRIREDRAFT_55545
Entry
TRIREDRAFT_55545  CDS       T02991                                 
Name
(RefSeq) hypothetical protein
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
tre  Trichoderma reesei QM6a
Pathway
tre03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:tre00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    TRIREDRAFT_55545
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tre03009]
    TRIREDRAFT_55545
Ribosome biogenesis [BR:tre03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    TRIREDRAFT_55545
SSDB
Motif
Pfam: Utp21 WD40 ANAPC4_WD40 Cytochrom_D1 Nup160 NBCH_WD40
Other DBs
NCBI-GeneID: 18485858
NCBI-ProteinID: XP_006962139
JGI: Trire2_55545
UniProt: G0RB34
Position
Unknown
AA seq 1041 aa
MPHSDPEGPLAKRQKVSTLANAAQPSNSSRIFAPFRTVGLVAPSSIPFTSFPLGKTTFQI
TTSVGRSLQTYDLLRGLNLVFVTRPQTPADITATFAYGKKVFAAWGGSQDGETQGLWVFQ
RGRKVDEVALPSDLKEPIQQIMIFGTWFIACAKTRIEVYKTATLEHYTTIHTMAAAKGGH
EITGGVVTMPTYLNKIFVGRKDGWVEIWNVSTAKLIYTILPPSPDSGAVTCLEPTPALSL
LAIAYSSGTLVITNVLTDKRALQVEAGNPDAPVTSISFRTDGLGAGHDGRKDGVMATATP
SSGDITFWDLNRGGRVMGVLRSAHNPPSGEGDAVRGGISKVEFLSGQAVIVSSGRDNSLK
SWIFDETPFSPIPKILHSRSGHSGPVNCLQFLPSDFDGAEAGNKWIISGGKDRSLWGWSM
RRDGQSTELSQGNIRKKAKKIGILAANALAHGPTTTLEDLKAPEITCIAASLNRDGGMGA
LPGKQEIWQKSRDPKKKLDAEISGMTGWESVVTAHKGDAFARTWFWGRKRAGRWAFPTGD
GTDVTTVAISPCGTFALVGSGAGGIDMYNLQSGVHRQRFPSKLTPAQARQLKMQQLRQAD
DVVQLQSEGNRKYPAGVGKHTKAVTGLVVDAMNKTVVSCSLDGKIKFWDFLTGTLLEQLD
WAPMTLPTGCRYHPANNLLAFSCDDLSIRVVDLETKKTIREFWGPKDVINDFCFSNDGRW
IIAASGDSVIRVWDLPTSHLIDAIRLEKPCKAIAMSYTGEYLAAALEDSPGVTIWTNKTL
YKHVPTRQISEAEISLVAAPTTAGEGNQGLLEAAFEDDKAEEEDSGIVAPTVDQISADLM
TLSLVPKSRWQTLLHLDLIKERNKPTEAPKLPEKAPFFLPSTSGTQVPGLKDGSEEAENS
SKSRISKFDKARFEETFTSKLRAGAANGNYDDFIEHLKSLSPSSADLELRSLSLGEDDDS
NELLHFIRALTTRLRARKDYELTQAWMTVFLRLHFDMVMESKTLLKALEEWKTDQEKECN
RLDDLVGYCSGVVSFLRSPRT
NT seq 3126 nt   +upstreamnt  +downstreamnt
atgccgcattccgatcccgaagggccgctggcaaagcgccagaaagtctcaaccttggcc
aatgccgcccagccgagcaattcctcgcgaatttttgctccgttccgaactgtcggcctt
gtcgctccgtcgagtataccttttacgtcttttccgctaggaaagactaccttccagatc
acaacatcggtcggccgatctctgcaaacctatgatctgctccgcggtctcaacctagtc
ttcgtcacccggcctcaaacgcccgccgatatcaccgccacgttcgcctatggaaagaag
gtctttgcagcatggggagggtctcaggatggcgagactcagggcctctgggtattccag
agaggaagaaaggtcgatgaggttgccctcccaagcgacctgaaggagccgatccagcag
atcatgatattcggcacctggttcattgcttgcgcaaagacgagaattgaggtctacaaa
acagcaacgctcgagcattacacgactattcacaccatggccgccgccaagggtggccat
gaaatcaccggcggcgtcgtcaccatgccgacatatctcaacaagatctttgttggtcgc
aaagatggctgggttgagatctggaacgtcagcactgccaaactcatctacaccattcta
cctccttccccagattctggcgctgtgacttgccttgagccaactccggcgctctccctg
ctggcaatcgcatattcgagcggcaccctcgttattaccaatgttcttaccgataagcgc
gctcttcaagtcgaggccggaaaccctgacgccccggttacctcgatctcgttccgaaca
gatggtttgggagctggacacgacggtagaaaagacggtgtcatggccacagccactccg
tcatccggcgacatcaccttttgggacctcaaccgtggaggtcgtgtcatgggagtctta
cgcagtgcccacaatccaccctcaggcgaaggcgatgctgtccgtggcggtatcagcaag
gtagagttcctgtcagggcaggcagtgattgtatccagtggccgagacaactcactcaag
tcctggatctttgatgagacacctttctcccccatcccgaagatcctgcactcgcgcagt
ggacattctggaccagtcaactgcctgcaattcttgccttccgactttgacggtgcggaa
gctggaaacaagtggatcatcagcggtggtaaggaccgaagcctgtggggatggagcatg
cgtcgcgatggacagagcaccgagctcagccagggtaacatacgcaagaaggcgaagaag
attggtatcctggctgccaatgctctggcccatggcccaacaactacgctagaagacctc
aaagcccccgaaatcacgtgtattgctgcctcgctcaaccgcgacggtggcatgggcgct
ctgcctggcaagcaggagatttggcagaagagccgggatcccaagaagaagttggacgcc
gagattagcggaatgacgggctgggaaagcgtagtcaccgctcacaagggcgatgccttc
gcccgtacctggttctggggccgaaagagggcaggtcgctgggcatttccgactggcgat
ggcaccgacgtcacaaccgtggccattagcccttgcgggacgtttgcgctggttggctca
ggggctggcggcatcgacatgtacaatctccagtcaggtgtacaccgccaacggtttccc
tccaagttgacgccggcacaagctcgtcagctcaagatgcagcagctccgtcaggcggat
gatgttgttcagctgcagagcgaaggcaaccgaaagtatcccgccggcgtgggcaagcat
accaaggctgttaccggcctggtggtcgacgccatgaacaagacggtggtgtcctgttcg
ctggacggaaagattaagttttgggatttcttgacgggaacccttctggagcagctggac
tgggcgccaatgacactcccgaccggttgccgataccatcccgccaacaatctcctggcc
ttttcttgcgatgacttgtccattcgcgttgttgacctggagacgaagaagactattcga
gagttctggggccctaaagatgtcatcaacgacttttgcttctccaacgacggccgatgg
atcattgccgcctctggcgattcggtcatcagagtttgggatctgcccaccagccatctc
atcgacgctatccgactggagaagccgtgcaaagctatcgccatgtcgtacacgggcgag
tatctcgctgctgctctcgaggacagccctggcgttacaatctggacgaacaagacgctg
tacaagcatgtcccgactcgccagatatccgaagcggagatcagcttggtggctgccccc
acaacagctggtgagggcaaccagggcttgctggaggctgcgttcgaggatgacaaggca
gaagaagaggactcgggtatcgttgcgcctaccgtcgatcagatcagcgccgatctcatg
actctgagtttggtgcccaagagtaggtggcagacactgcttcatctggatctgatcaag
gagcgcaacaagccgacagaggcgccaaagcttcccgaaaaagcgcccttcttcttgccc
tcgacctcgggcactcaagtgcccgggctcaaggacggctcagaggaagcagagaacagc
agcaagtctcgcatctcgaagtttgacaaggctcgcttcgaggagacatttacgtcgaag
ctgcgtgctggcgcggcgaatggcaactacgacgacttcatcgagcacctcaagtctctg
tctccctcaagcgccgatctcgaacttcgttccctttctctgggcgaagacgacgactcc
aacgagctactccactttatccgagccctgacaacacggctacgagcgcgcaaggactac
gagctcacccaggcgtggatgaccgtgttcctgcggctgcactttgatatggtgatggag
agcaagacgctgctgaaggctcttgaggagtggaagacggatcaggagaaggaatgcaac
aggctggatgatttggttggatattgcagtggcgtggtgagctttttgagaagcccgagg
acgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (26)   

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