KEGG   Trichoderma reesei QM6a: TRIREDRAFT_62301
Entry
TRIREDRAFT_62301  CDS       T02991                                 
Name
(RefSeq) DNA repair protein
  KO
K08737  DNA mismatch repair protein MSH6
Organism
tre  Trichoderma reesei QM6a
Pathway
tre03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tre00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    TRIREDRAFT_62301
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tre03400]
    TRIREDRAFT_62301
DNA repair and recombination proteins [BR:tre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     TRIREDRAFT_62301
SSDB
Motif
Pfam: MutS_V MutS_III MutS_I MutS_IV MutS_II AAA_23 AAA_21 DUF6549 AAA_27 AAA_29
Other DBs
NCBI-GeneID: 18486897
NCBI-ProteinID: XP_006965845
JGI: Trire2_62301
UniProt: G0RKM4
Position
Unknown
AA seq 1205 aa
MPSDKAAAAARTPAKAARPAAAAASSTKQKSIMSFFQKSSPVPAPSAPREKVSSDHQHSS
PLKETKANSLPKAKPSTKLSTPLPSSDAPEPPSSQENMESTAKRTTSRSIKASDSDMAPS
SPVRKGKRAINYAESSDEDEPFAYGAASQARRRGRARNNVVEDEDEYGGSETAGQEEEDD
MDDFVVSDESDGETARSKKRKRPSKPSSARKRTNLLPSAKEDTVQITTTLDDMDLDDLPA
TSTAKQWSYDPDSTEKQPVVTPADRVVTKDPKVKEKAYMKEPDERYPWLANIRDKEKRPP
TDPDYDPRTIFIPPGAWAKFSPFEKQYWEIKQDLWDTIVFFKKGKFYELYEKDATIGHQE
FDFKMTDRVNMRMVGVPEGSLDHWVNQFIAKQYKVARVEQMETNLGKEMRERQDKSGKKA
DKVISRKLGCILTAGTLVDGSMLQDDMAAYCVAIKESVVDDLPAFGIAFTDTATGKFFLS
GFVDDVDRTKFETLIAQIGPRELLLEKSGLSTKSLRILKNNTSPTTIWTHLKPGTEFWDA
DTSRRELSCGKYFLKAEGEEEEVWPEALQELKDNDLVMSAIGGLVSYLRFLKLEAPLLSQ
GNFEVYKPIQKNGTLVLDGQTLTNLELFSNTVNGNTDGTLFGLLNKCITPFGKRLFRQWV
AHPLCDIARINERLDAVELLNDDPSVREQFASQLVKMPDLERLISRIHAGACKPEDFVRV
LEGFEQIEYTMTLVGAFKGGNGLLDRLISSMPNLEEPLAYWSTAFDRRRAKEEKLMIPES
GVDEDFDASVARIEEIKSQLDDLLAEKKTELKCKTLKFTDIGKEIYQIEAPKSVKIPSSW
RQMSATKDVKRWYFTELTTLVRELQEAEETHSQLIREVASRFCKKFDVDYETWLKAIKII
AQLDCLVSLAKASMSLGEPSCRPQFVEEERSVLEFEELRHPCMINTVDDFIPNDIKLGGD
QAKINLLTGANAAGKSTVLRMSCIAVIMAQVGCFVPARSARLTPVDRIMSRLGANDNIFA
AQSTFFVELSETKKILAEATPRSLVILDELGRGTSSYDGVAVAQAVLHHVATHIGCIGFF
ATHYHSLATEFENHPEIRARRMQIHVDDAQRRITFLYKLEDGVAEGSFGMHCAAMCGISD
RVIKRAEIAAKEWEHTSRLKDSLDKAKTGCYIPLGILSDVGSLLGDKGDVGAQGVDVLLR
AIESL
NT seq 3618 nt   +upstreamnt  +downstreamnt
atgcccagtgacaaggcagcggccgctgctcgcacgccagcaaaggccgcccggccagct
gcggcagccgcctcctcgaccaagcagaaatccatcatgtccttcttccaaaagtcgtcg
cccgtcccggcgccctccgcaccccgcgaaaaggtctcgtccgatcaccagcactcctcc
cctctcaaagagacaaaggccaactctctgcccaaggcgaagccctccacaaagctctcc
accccgctgccctccagcgatgcgccagagcccccgagctcgcaggagaacatggagtcg
accgccaagcggaccacgagcaggtctatcaaggcctcggatagcgacatggcgcccagc
agcccagttagaaaggggaaaagggccatcaactatgccgagtcctcggatgaggatgaa
cccttcgcctacggagcggcttcgcaggctcggcggcgtggtagggcccgcaacaatgtt
gtcgaagacgaagatgaatacggtggaagcgagacggctgggcaagaggaagaggatgac
atggacgactttgttgtatcagatgaatctgacggagagactgctcgatccaaaaagagg
aagcgcccgtcaaaaccctcgtcggcgcgcaaacgcaccaatcttttgccctccgccaaa
gaagatacggtgcaaatcacgacgactctcgacgatatggatctagatgaccttcccgcc
acctccacagcgaagcaatggtcctacgatccagactctaccgaaaagcagcccgtcgtc
acaccggcggatcgagtcgtgaccaaagatcccaaggtgaaggaaaaggcgtacatgaag
gagccggacgagcgttatccttggctcgctaatattcgagacaaggagaagcgtccgccc
acggatccggattatgacccccgtaccatcttcattccgccaggcgcctgggccaagttt
tccccctttgagaagcagtactgggagattaagcaagacctctgggacacaatcgtcttc
ttcaaaaagggcaagttctacgagctttacgaaaaagacgcaaccattggccaccaggag
tttgacttcaagatgacggatcgagtcaacatgcgcatggtcggtgttcctgagggttcc
cttgaccattgggtcaaccagttcatcgccaagcagtacaaggtggcccgtgtagagcag
atggagaccaacctgggcaaggagatgcgagaacggcaagacaagagcggcaaaaaggct
gacaaggtcatctctcgaaagctgggctgcatcctgacggctggaaccctggttgatggc
agcatgcttcaggacgacatggccgcttactgcgtcgccatcaaggaatccgtggtggat
gacttgccagcctttggcatcgccttcaccgatactgccactggcaaattctttctctct
ggcttcgtggacgatgttgatcggaccaagtttgaaacattgattgctcagattggccct
cgcgagcttctactcgaaaagtccggcctgtccacaaagtctcttcgcatcctcaagaat
aacacgagccctaccaccatctggactcatctgaaaccaggcacagaattctgggatgcc
gacacctctagacgagagctctcctgtggcaagtactttctcaaagcggaaggcgaagaa
gaagaagtctggccagaagccctccaggaactcaaagacaacgatctcgtcatgtctgcc
attggtgggcttgtctcctatctccgattcctcaagctggaagcccctctattatctcag
ggcaactttgaggtgtacaaacccatccaaaagaacggcacccttgttttggatggccag
actctgaccaatctggagctgttctcaaacactgttaatggcaacactgatggcaccctg
tttggtctacttaataagtgcatcactccctttggcaagcgtctgtttcgccagtgggtt
gctcacccgctgtgtgacattgcccgtatcaacgagcgtctggacgccgtcgagctgctg
aatgacgatccttctgttcgcgagcagtttgcctcccagctcgtcaagatgccggatctc
gagcgactcatttcgcgcatccacgccggtgcctgcaaacctgaggactttgtccgcgtc
cttgagggcttcgagcaaatcgagtacacaatgactcttgttggtgccttcaagggtggg
aatggcctgcttgatcggctgatctcatccatgcccaacctcgaggagccgctggcttac
tggagcacggcattcgatcgacggagagccaaggaggagaagctgatgattccagaaagc
ggcgtagatgaagactttgacgccagtgtggctcgaatcgaagagatcaagagtcagttg
gacgatctgctggctgaaaagaagacggagctcaagtgcaaaaccctcaagtttaccgat
atcggcaaagaaatttaccaaatcgaagcgcccaagagtgtcaagatcccttccagctgg
cgtcaaatgtctgcgaccaaggacgtcaagcgctggtactttaccgagctcaccactctt
gtccgagagctccaagaagccgaggagactcactcgcagctcatccgggaagtcgcgtcg
cgcttctgcaagaagtttgacgtggactacgagacgtggttgaaagccatcaaaatcatt
gcccagctggactgtctggtcagccttgccaaggcatccatgtcgcttggagagcccagc
tgcaggccgcagtttgtcgaggaggagcgcagcgtcttggagttcgaggagctgagacat
ccctgcatgattaacacggttgatgactttattcccaacgacatcaagctcggtggtgac
caggccaagattaaccttctgaccggtgccaacgcagccggcaagtcgacggtcctgcga
atgtcgtgcattgccgtcatcatggcccaggttggctgcttcgttccggccaggtcagct
cgccttacccccgtggaccgcatcatgtcccgtttgggagccaacgacaacatctttgcc
gcgcaatccaccttcttcgtggaactctccgagaccaagaagattctcgccgaggccact
ccccgctcactcgtcatcctcgacgaactgggtcgaggaacgagctcatacgatggtgtc
gctgtcgcacaagccgtcctgcatcatgtagcaacccacatcggctgcatcggcttcttc
gcaacgcactaccactccctcgccaccgagtttgagaaccatcccgagattcgcgctcgc
cgcatgcagatccacgtcgacgacgcacagcgccgcatcaccttcctgtacaagctggag
gatggcgtcgccgagggcagtttcggcatgcactgcgccgccatgtgcggcatctcggac
cgcgtcattaagagagctgagattgccgcaaaggaatgggagcacaccagccggctcaag
gacagcctcgacaaggccaagacggggtgctacattccgctgggcattcttagcgacgtc
ggttcgctgctcggggacaagggggacgtgggggcccagggggtggacgtgttgctcagg
gccattgagagcctgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (42)   

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