KEGG   Trichoderma reesei QM6a: TRIREDRAFT_63547
Entry
TRIREDRAFT_63547  CDS       T02991                                 
Name
(RefSeq) hypothetical protein
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
tre  Trichoderma reesei QM6a
Pathway
tre03020  RNA polymerase
tre03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    TRIREDRAFT_63547
  09124 Replication and repair
   03420 Nucleotide excision repair
    TRIREDRAFT_63547
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tre03021]
    TRIREDRAFT_63547
   03019 Messenger RNA biogenesis [BR:tre03019]
    TRIREDRAFT_63547
   03400 DNA repair and recombination proteins [BR:tre03400]
    TRIREDRAFT_63547
Transcription machinery [BR:tre03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     TRIREDRAFT_63547
Messenger RNA biogenesis [BR:tre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     TRIREDRAFT_63547
DNA repair and recombination proteins [BR:tre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      TRIREDRAFT_63547
SSDB
Motif
Pfam: SHS2_Rpb7-N S1
Other DBs
NCBI-GeneID: 18487061
NCBI-ProteinID: XP_006966275
JGI: Trire2_63547
UniProt: G0RMB4
Position
Unknown
AA seq 170 aa
MFFLYNMERRVTLHPSYFGRNMHELVTSKLLKDVEGTCAGSYYIISIMDTFDISEGKILP
GNGLAEFTVGYRAVVWRPFKGETVDAVVYSINPQGFFAQAGPLRLFVSAHLIPSDIKWDP
NATPPQFTNNEDTVIEPGTHVRVKIIGTRTEVGEMWAIGSIKEDYLGYAG
NT seq 513 nt   +upstreamnt  +downstreamnt
atgttcttcctctacaacatggagcgcagggtgaccctgcatccgtcctacttcggccgc
aacatgcacgagcttgttactagcaagctgctgaaagatgtcgaaggcacctgcgccggc
agctactacatcatctccatcatggacacgtttgacatttccgaaggcaagatcttgcca
ggcaacggacttgcagagtttacggttggctaccgtgccgtcgtgtggcggccgttcaaa
ggagagacggttgatgccgttgtctactccatcaatccgcagggtttcttcgcccaggcc
ggcccgctcagactctttgtgtctgcccatctgatacctagcgacatcaaatgggatccc
aacgcgaccccccctcaatttaccaacaacgaagacaccgtcatcgagccgggcacgcat
gtgcgcgtcaagattattggcacgcgaacagaagtcggcgaaatgtgggccattggaagc
atcaaggaggactacctagggtatgctggatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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