KEGG   Trichoderma reesei QM6a: TRIREDRAFT_79686
Entry
TRIREDRAFT_79686  CDS       T02991                                 
Name
(RefSeq) polyadenylate-binding protein
  KO
K13126  polyadenylate-binding protein
Organism
tre  Trichoderma reesei QM6a
Pathway
tre03015  mRNA surveillance pathway
tre03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tre00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    TRIREDRAFT_79686
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TRIREDRAFT_79686
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tre03019]
    TRIREDRAFT_79686
   03041 Spliceosome [BR:tre03041]
    TRIREDRAFT_79686
Messenger RNA biogenesis [BR:tre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     TRIREDRAFT_79686
   mRNA cycle factors
    Stress granule specific factors
     TRIREDRAFT_79686
Spliceosome [BR:tre03041]
 Complex C
  Other components
   Complex C specific factors
    TRIREDRAFT_79686
SSDB
Motif
Pfam: RRM_1 PABP RRM_7 RRM_5 RRM_occluded YflT
Other DBs
NCBI-GeneID: 18489059
NCBI-ProteinID: XP_006966916
JGI: Trire2_79686
UniProt: G0RNC4
Position
Unknown
AA seq 745 aa
MAANTTSAAVDQLASDLNNTSLNGSGDVKAPAIDTSVSAGAEDASAPTPTAAPHPQNSAS
LYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTPDGEKALEEL
NYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQ
DENGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKDRQSKFEEMKANFT
NVYVKNIAPDVTDEDFRQLFEKFGDVTSSSLARDQEGKTRGFGFVNFTTHEAAFKAVEEL
NGKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLDDDVDDEKLR
QMFAEFGPITSAKVMRDVPQEGEEEAKDQEKDKENQKEGEKEGESAEGAEKKTEKKSDKK
LGKSKGFGFVCFSNPDDATKAVAEMNQRMINNKPLYVALAQRKDVRKSQLEASIQARNQL
RMQQAAAAAGMPQQYMQPPVFYAPGQQPGFIPQGGRGIPFPQPGMPMPNVQGGRPGQFPG
YPQQGGRNMPQGLPPNMYSIPGQFPPQFGQPGTPQFMAAMQQAQQAAALAGGRGGAPQGG
RGAMAGMPPNVQGGMPGYPPNNRQMGRNNNGGNGNNAGRNGNFPNQAPRDSNTASMLQNQ
LAAAQPAQQKQILGELIFPKIQAINSELAGKITGMLLEMDNSELVNLIEDEAALKAKVDE
ALAVYDEYVKSQATGSEKKEEETKA
NT seq 2238 nt   +upstreamnt  +downstreamnt
atggccgcaaacaccacctccgccgctgttgatcagctcgccagcgatctcaacaacacc
tccctcaatggcagtggcgatgtcaaggctcctgccatcgacacgtccgtcagcgccggt
gctgaggatgcctctgctcctacccccaccgccgctcctcacccccagaactcggcctct
ctctacgtcggagagcttgacccctccgtcaccgaggccatgctcttcgagctcttctcc
cagattggtgctgtggcttccatccgtgtctgccgtgacgccgtcacccgccgctctctg
ggctacgcctatgtgaactacaactccacccctgacggcgagaaggccttggaggagctc
aactacaccctcatcaagggccgtccctgccgcatcatgtggtcgcagcgtgaccccgct
ctgcgcaagaccggccagggcaacgtgttcatcaagaacttggacgttgctattgataac
aaggctctccatgacaccttcgctgcctttggcaacattctcagctgcaaggttgcgcag
gacgagaacggaaactccaagggttacggattcgtccactacgagaccgatgaggccgct
gctcaggccatcaagcacgtcaacggcatgctgctcaacgagaagaaggtctatgtcggc
taccacatccccaagaaggaccgccagagcaagtttgaggagatgaaggccaacttcacc
aacgtctacgtcaagaacatcgcccctgatgtcaccgacgaggacttccgtcagctcttt
gagaagtttggtgacgtcacctcgtcttctctggctcgcgaccaggagggcaagacccgt
ggattcggcttcgtcaacttcaccacccacgaggctgccttcaaggctgtcgaggagctc
aacggcaaggacttccgtggtcaggacctttacgttggccgtgctcagaagaagcatgag
cgcgaggaggagctgcgaaagtcttatgaggctgcgcgccttgagaaggccaacaagtac
cagggcgtcaacctgtacatcaagaaccttgatgatgatgtggatgacgagaagctccga
cagatgtttgccgagtttggccccatcacttctgccaaggtcatgagggatgttcctcag
gagggcgaggaggaagccaaggaccaggagaaggacaaggagaaccagaaggagggcgaa
aaggagggcgagtccgccgagggcgccgagaagaagactgagaagaagtcggacaagaag
ctcggtaagagcaagggcttcggcttcgtctgctttagcaaccccgacgatgccaccaag
gctgttgctgagatgaaccagcgcatgatcaacaacaagcctctgtatgttgcccttgct
cagcgcaaggacgtccgcaagagccagcttgaggctagtatccaggctcgcaaccagttg
cggatgcagcaggccgccgcggcagctggcatgccgcagcagtacatgcagccccccgtt
ttctatgctcctggccagcagcccggcttcatcccccagggtggccgcggcattcccttc
ccccagcccggtatgcccatgcccaacgttcagggcggtcgtcctggccagttccctgga
taccctcagcagggtggccgcaacatgcctcagggcctcccccccaacatgtacagcatc
cccggccagttcccccctcagttcggacagcccggaactccccagttcatggctgccatg
cagcaggctcagcaggctgctgctcttgccggaggccgcggcggcgctcctcagggcggc
cgtggcgccatggccggcatgcctcccaatgtccagggtggaatgcccggctaccccccc
aacaaccgccagatgggccgcaacaacaacggcggcaacggcaacaacgctggccgcaac
ggcaacttccccaaccaggctcctcgtgacagcaacaccgcctccatgctccagaaccag
cttgccgcggcccagcctgcccagcagaagcagattcttggtgaactgatcttccccaag
atccaggccatcaactctgagctcgccggcaagatcaccggtatgctcctggagatggac
aactccgagcttgtcaaccttattgaggatgaggctgctctgaaggccaaggttgacgag
gcgctggccgtctacgacgagtacgtcaagtctcaggccaccggctctgagaagaaggag
gaggagaccaaggcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (33)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (53)   

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