KEGG   Talaromyces rugulosus: TRUGW13939_07977
Entry
TRUGW13939_07977  CDS       T06879                                 
Name
(RefSeq) uncharacterized protein
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
trg  Talaromyces rugulosus
Pathway
trg03420  Nucleotide excision repair
trg04111  Cell cycle - yeast
trg04120  Ubiquitin mediated proteolysis
trg04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:trg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    TRUGW13939_07977
   04120 Ubiquitin mediated proteolysis
    TRUGW13939_07977
  09124 Replication and repair
   03420 Nucleotide excision repair
    TRUGW13939_07977
 09140 Cellular Processes
  09143 Cell growth and death
   04111 Cell cycle - yeast
    TRUGW13939_07977
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:trg04121]
    TRUGW13939_07977
   03400 DNA repair and recombination proteins [BR:trg03400]
    TRUGW13939_07977
Enzymes [BR:trg01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     TRUGW13939_07977
Ubiquitin system [BR:trg04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   TRUGW13939_07977
  Multi subunit Ring-finger type E3
   SCF complex
    Ring finger protein
     TRUGW13939_07977
   Cul2 complex
     TRUGW13939_07977
   Cul3 complex
     TRUGW13939_07977
   Cul4 complex
     TRUGW13939_07977
   Cul7 complex
     TRUGW13939_07977
   Cul8 complex
     TRUGW13939_07977
   Cul9 complex
     TRUGW13939_07977
DNA repair and recombination proteins [BR:trg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      TRUGW13939_07977
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      TRUGW13939_07977
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 55995466
NCBI-ProteinID: XP_035347006
Position
IV:join(3628378..3628491,3628560..3628638,3628692..3628762,3628825..3628923)
AA seq 120 aa
MADVEMQDASSAKDKVAKTSKSGAGEASEGKKRFEVKKWNAVALWAWDIVVDNCAICRNH
IMDLCIECQANQGSSTTEECTVAWGICNHAFHFHCISRWLKTRQVCPLDNRDWEFQKYGR
NT seq 363 nt   +upstreamnt  +downstreamnt
atggctgatgttgagatgcaagacgctagttccgcgaaggacaaggtagccaagacctcc
aagtctggagccggcgaggcctcggaagggaagaagcgcttcgaagttaagaaatggaac
gccgttgcgttatgggcctgggacattgtggttgacaactgcgccatttgccggaatcac
attatggatctatgtatcgaatgccaggccaaccagggctcgtcgaccacggaggagtgc
actgtggcatggggaatttgtaaccatgcgtttcactttcactgcatttcgagatggcta
aagactcgacaagtctgtccgttggataacagggactgggagttccaaaaatacggacgg
taa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (22)   

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