KEGG   Treponema sp. OMZ 838: JO41_00170
Entry
JO41_00170        CDS       T03454                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
trm  Treponema sp. OMZ 838
Pathway
trm03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:trm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    JO41_00170
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:trm03021]
    JO41_00170
   03400 DNA repair and recombination proteins [BR:trm03400]
    JO41_00170
Enzymes [BR:trm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     JO41_00170
Transcription machinery [BR:trm03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     JO41_00170
DNA repair and recombination proteins [BR:trm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      JO41_00170
SSDB
Motif
Pfam: RNA_pol_Rpb6 SopD
Other DBs
NCBI-ProteinID: AIW88403
Position
44419..44625
AA seq 68 aa
MIFPLKELIEFKGNIYEITCAATRRAFQLVTIQDPILEENNDKVVCTAASQVFTGAIDYK
IEYRPDHS
NT seq 207 nt   +upstreamnt  +downstreamnt
atgatttttccgttaaaagaattgattgaattcaaaggcaatatttatgaaattacctgt
gctgcaacacggcgcgcttttcagctggtaactattcaagatccgatactcgaagaaaac
aacgataaggttgtgtgcactgcagcgtcgcaagtgtttaccggtgctatcgactataaa
atagaataccgccccgatcattcctaa

DBGET integrated database retrieval system