KEGG   Treponema sp. OMZ 838: JO41_06340
Entry
JO41_06340        CDS       T03454                                 
Name
(GenBank) hypothetical protein
  KO
K11531  lsr operon transcriptional repressor
Organism
trm  Treponema sp. OMZ 838
Pathway
trm02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:trm00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    JO41_06340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:trm03000]
    JO41_06340
Transcription factors [BR:trm03000]
 Prokaryotic type
  Other transcription factors
   Others
    JO41_06340
SSDB
Motif
Pfam: Sugar-bind Sigma70_r4 HTH_Crp_2 HTH_24 HTH_23 KORA UPF0175 Sigma70_r4_2 HTH_3 Terminase_5 HTH_10 GntR MarR_2 Glucosamine_iso HTH_28 Peptidase_C78
Other DBs
NCBI-ProteinID: AIW89472
Position
1387365..1388291
AA seq 308 aa
MTDDWEKELIVRIAWYYYIQKKTQKEIADMLGISRMRVIRLLEKAERENVVQISIHNDFR
GRLKTEQNLIDIYRLDDAFVIPSDERHTPETLNDAVAKAAAMYIDEHFSDTPIINIGYGD
TTGRFMNYFSQISKKKPTYISLTGGVSIYLLNTQLSAGNASLYLIPAPFVASTKEIVDAI
KKETAVIEISRMHSTASCSVIGIGGMDDNATVIKSGIIQKNDFDFLKMRGAAGDVLAHFF
DENGTFIPVSTEERLITYSPEALKKLHNVIAVAAGTVKRTAIRAALRGQYPNILITDEAT
AEWLIENK
NT seq 927 nt   +upstreamnt  +downstreamnt
atgacggatgattgggaaaaagagcttatcgtacgtatcgcatggtattattacatacaa
aagaaaacgcaaaaagaaatagccgatatgctcggtatttcccgtatgcgtgttataaga
ttgcttgaaaaagctgaacgggaaaacgttgtgcaaatcagcattcataatgattttaga
ggcaggctgaaaaccgagcaaaatttgatcgatatctaccggcttgatgatgcctttgta
atcccttccgatgaacgccatacccccgaaacgcttaacgatgcggttgcgaaagcggct
gctatgtacatcgacgaacacttctccgatacgcccatcatcaatatcggatatggtgat
acgaccggacggtttatgaactatttttcgcaaatttcaaaaaagaaaccgacgtatatc
tcgctcaccggtggcgtcagtatttatctgctcaacacacagctctctgctggaaatgca
tcactctaccttattccggctcctttcgttgcatcaacaaaagaaattgttgacgcaatc
aaaaaagaaacggccgttattgaaatttcgcggatgcactcgacggcaagttgttcggtt
atcggcatcggcggtatggatgataatgcgactgttattaagtccggaatcatacaaaaa
aacgatttcgattttctcaaaatgcgcggcgctgcaggtgatgtgcttgctcattttttt
gacgaaaacggaacttttattccggtttctaccgaagaacgccttatcacatattcaccg
gaagcattaaaaaaactgcacaatgtcattgccgttgctgctggaacggttaaacgcact
gcaatcagagcggcgcttcggggacagtacccgaatattctcataacggatgaagcaacc
gcagagtggctcattgaaaataagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (16)   
   Pfam (16)   
All databases (28)   

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