KEGG   Thermomicrobium roseum: trd_0002
Entry
trd_0002          CDS       T00845                                 
Name
(GenBank) DNA polymerase III tau and gamma subunits
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
tro  Thermomicrobium roseum
Pathway
tro03030  DNA replication
tro03430  Mismatch repair
tro03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:tro00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    trd_0002
   03430 Mismatch repair
    trd_0002
   03440 Homologous recombination
    trd_0002
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tro03032]
    trd_0002
   03400 DNA repair and recombination proteins [BR:tro03400]
    trd_0002
Enzymes [BR:tro01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     trd_0002
DNA replication proteins [BR:tro03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     trd_0002
DNA repair and recombination proteins [BR:tro03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     trd_0002
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA_16 AAA AAA_5 RuvB_N AAA_22 nSTAND3 NACHT AAA_19 TsaE
Other DBs
NCBI-ProteinID: ACM06107
UniProt: B9L1A1
Position
102..1154
AA seq 350 aa
MNATNDLSPSRATPGWPIIGHEGAVRTLARAIESGQVHHAYLLAGPAGIGRTTLAFVFAQ
ALLCEGAAEQRPCGTCRSCQRIARRVHPDVTRIGLDTGAEEAKQVSIDQVRELRASLSLR
PLEGAWRVAIVDDAERLSREAADALLKTLEEPPPYAVLVLVAEDAQALPETIRSRCQTIV
LQPLPISVVARALEVRGAAPELANRLARETRGRIALAFRLVSDEAARVQREKRVAEVIAA
MTEPLAAIGFARRLAEQYRRGRRAEVLSSLQLALELWRDALWLAADPSAPIVHEDARTTL
ERFARRCGIAGACAGLSATLQALADLEANVQARLALDAAMVTWAEVSRCA
NT seq 1053 nt   +upstreamnt  +downstreamnt
gtgaacgcgacgaacgacctctcgccatctcgagcgacacccggttggccgatcatcggg
cacgagggagcggtcaggacgctcgcccgggccatcgaaagcggccaggtgcatcatgcc
tacctcctggctggtccggccgggatcgggcggacgacgctcgctttcgtcttcgcccaa
gccttgctctgcgagggagcagctgagcagcggccgtgcgggacctgccgctcctgccag
cggatcgcgcgccgcgtccaccccgacgtgacgcgtatcggcctggataccggggcagaa
gaggcgaagcaggtctcgatcgatcaggtgcgcgagctccgggcgagtctcagtctgcgt
cccctggaaggcgcgtggcgggtcgcgatcgtcgacgatgccgagcggctttcgcgcgag
gccgccgatgccttgctgaagaccttggaggaacctccgccgtacgctgtgctcgtgctc
gtcgccgaggatgcccaagcgttgcccgagaccatccgctcccgctgccagacgatcgtg
ctgcagccgctgccgatatcggtcgtcgcgcgcgcactcgaggtgcggggtgcggcgccg
gagttggcgaaccggctcgcgcgcgagactcggggacggatcgcgctcgcgtttcgcttg
gtcagcgacgaggctgcgcgggttcaacgcgagaagcgcgtggctgaggtgatcgccgct
atgaccgagccgctcgccgccatcggcttcgcgcggcgcttggctgagcagtaccggcgg
gggcgtcgcgccgaggtcctctcgtcgctccagctcgcactcgagctgtggcgcgatgcg
ctctggctcgctgctgatccgagtgctccgatcgtgcacgaagatgcccgcacgacgctc
gagcggttcgctcgccgctgtgggatcgccggtgcgtgtgctggtctttcggcgaccctt
caggcactagcggacctcgaggcgaacgtgcaggcgcgcctcgcgctcgatgccgcgatg
gtgacctgggcggaggtgagccggtgcgcatag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (38)   

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