KEGG   Thermomicrobium roseum: trd_0603
Entry
trd_0603          CDS       T00845                                 
Name
(GenBank) ribonuclease Z
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
tro  Thermomicrobium roseum
Brite
KEGG Orthology (KO) [BR:tro00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tro03016]
    trd_0603
Enzymes [BR:tro01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     trd_0603
Transfer RNA biogenesis [BR:tro03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    trd_0603
 Prokaryotic type
    trd_0603
SSDB
Motif
Pfam: Lactamase_B_2 Lactamase_B FAM186A_PQQAQ
Other DBs
NCBI-ProteinID: ACM05790
UniProt: B9KYQ3
Position
complement(595403..596314)
AA seq 303 aa
MVDVCLLGTGGMMPLPDRWLSALLVRCEGHVVLLDCGEGTQISWRYTGWSFRDLDAIVFT
HLHADHVAGLPGILYALAFADRQEPVRIIGPVGTAQVVAALRSIVPTLPFPVETLELSGT
SELELPGGLLLRALPVTHRIPCFAYTLHRPRGRRFDPQRAQALGIPMTLWHRLQRGETVE
FAGQLLTPDLVLGPPRRGITVAFVTDTRPTPELPGFVAGADLLVCEGMYGDTALLPRAIE
RGHMLMQEAAELARAASVERLWLTHFSPSLTDPEAWLPAIRAIFPASEIGPVHQTVTLRY
RDA
NT seq 912 nt   +upstreamnt  +downstreamnt
atggtcgacgtctgtcttctcggcaccggtgggatgatgccgcttccggatcgttggctg
tccgctctccttgtccggtgcgaagggcatgttgtcctcctcgattgcggcgagggcacg
cagatttcctggcgatacaccggatggagcttccgcgatctcgatgcgatcgtcttcacg
cacctccacgccgatcatgtcgctggtctccctggtatcctctacgctcttgccttcgcc
gaccgtcaggagccggttcgcatcatcggccctgtcggtaccgcgcaggtggtcgctgca
ctgcggagcatcgtaccgactctcccgtttcctgtcgaaacactggagctctccgggacc
agcgaactcgaacttcctggcggactcctcctgcgcgccctgccggtcacacaccggatc
ccttgcttcgcatacacgctgcaccgtccacggggacgccggttcgacccacagcgagcg
caggcgctcggcatcccgatgacgctctggcaccgcctgcagcgtggagaaacggtcgag
ttcgcgggacagctcctgacccctgatctcgtgctcggcccgccgcgacgcggtatcacc
gtcgccttcgtgaccgatacccgacccaccccagagcttcccgggttcgtcgctggagcg
gacctcctggtctgtgaggggatgtacggcgacaccgctctgctgccgcgagcgatcgaa
cgcggccatatgctgatgcaagaggcagccgaattggcccgtgccgccagcgtcgagcgc
ctctggctcactcattttagtccttcgctgaccgatcccgaagcctggttacctgccatt
cgcgcgattttccccgcgagcgagatcggccccgtgcaccagactgtgacgctgcgttac
cgggacgcgtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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