KEGG   Thermomicrobium roseum: trd_1701
Entry
trd_1701          CDS       T00845                                 
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII, small subunit
  KO
K03602  exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
Organism
tro  Thermomicrobium roseum
Pathway
tro03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tro00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    trd_1701 (xseB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tro03400]
    trd_1701 (xseB)
Enzymes [BR:tro01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     trd_1701 (xseB)
DNA repair and recombination proteins [BR:tro03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     trd_1701 (xseB)
SSDB
Motif
Pfam: Exonuc_VII_S SIKE DUF6687 DUF5594
Other DBs
NCBI-ProteinID: ACM06160
UniProt: B9L0Z1
Position
1704217..1704507
AA seq 96 aa
MTEQADGAVPHPIDLFEQLVSEVEAIVQRLENENLPLAEAIREYQRGVELIRQCNAILDQ
AELQISQLRTSSPEAGLAFPADLLGFLDSEDDSSLA
NT seq 291 nt   +upstreamnt  +downstreamnt
atgaccgagcaagcggacggcgcggtgccacacccgatcgacctcttcgaacagctcgtc
agcgaagtcgaagcgatcgtccagcgactggagaacgagaacctgcccctggccgaggcg
atccgggagtaccagcgaggagtcgagctgatccgccaatgcaacgccattctggatcaa
gccgaactgcagatctcccagttgcgcaccagctcgccggaggccggactcgccttcccg
gctgacctgctcggctttcttgatagcgaagacgattcttccctcgcttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (16)   

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