KEGG   Trichoderma reesei RUT C-30: M419DRAFT_4475
Entry
M419DRAFT_4475    CDS       T06031                                 
Name
(GenBank) hypothetical protein
  KO
K02328  DNA polymerase delta subunit 2
Organism
trr  Trichoderma reesei RUT C-30
Pathway
trr03030  DNA replication
trr03410  Base excision repair
trr03420  Nucleotide excision repair
trr03430  Mismatch repair
trr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:trr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    M419DRAFT_4475
   03410 Base excision repair
    M419DRAFT_4475
   03420 Nucleotide excision repair
    M419DRAFT_4475
   03430 Mismatch repair
    M419DRAFT_4475
   03440 Homologous recombination
    M419DRAFT_4475
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:trr03032]
    M419DRAFT_4475
   03400 DNA repair and recombination proteins [BR:trr03400]
    M419DRAFT_4475
DNA replication proteins [BR:trr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase delta complex
    M419DRAFT_4475
DNA repair and recombination proteins [BR:trr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase delta complex
      M419DRAFT_4475
   MMR (mismatch excision repair)
    DNA polymerase delta complex
     M419DRAFT_4475
SSDB
Motif
Pfam: DNA_pol_E_B DNA_pol_D_N
Other DBs
NCBI-ProteinID: ETS06183
JGI: TrireRUTC30_1_4475
UniProt: A0A024SJH8
Position
Unknown
AA seq 504 aa
MVKLEDISSLLEAPAHLPHKPPVRAPSAYKPLHSYALDKNRSYKQQYGDMYFLRLAKIKP
AVEEVAAKAWQDTQIGGERAKRVDRVLDVRQGELCWVAGTVYMDMKLKPNILEDVSKDRW
LSAPISSQKYYSDDGSDQTMLEDDSGRVRLVGDLLSTIPLVTGCIIAVMGTENTHGEFEV
IDIKVPDLAPQPERWALSKAPSAGGKAKSEDTEMTDSPSEGGGKKIAIVSGLSFSGTDAS
YDLELNLLLEYLLGEALGPGEQAGVSQISRLIIAGDSISMTAAKDTDDDDDEVKKRAQKK
YGYDASAYNPIPSQLFDEFLSELLPSIPVTLLPGAQDPANASYPQQPIHTAMFPISRAYA
ADAAAASASQPGWFDTVTNPWEAEVEGWRVLGTGGQNVDDVFKYVESDDRLGMMEAMCRW
RCCAPTAPDTLWSYPFQEDDPFVLKSCPHVYFVGCQPEFATKVIHGPDGQSVRLIAVPSF
SKSKEFVLVDTETLEVSKVRITSR
NT seq 1515 nt   +upstreamnt  +downstreamnt
atggtcaagctcgaggacatctccagcctcctcgaggcgcccgcgcatctcccgcacaaa
ccccccgtccgagccccctccgcctacaagccgctgcactcgtacgccctcgacaagaac
cgctcgtacaagcagcagtacggcgacatgtacttcctgcggctggccaagatcaagccc
gccgtggaagaggtcgccgccaaggcgtggcaggacacgcagattggcggcgagcgggcc
aagagggtcgaccgcgtgctggatgtgcggcagggcgagctgtgctgggttgcgggcacc
gtctacatggacatgaagctgaagcccaacattctcgaggatgtgtccaaggatcgctgg
ctgtcggcgcccatctcctcgcaaaagtactactccgacgacggctccgaccagaccatg
ctcgaggacgactcgggccgcgtccgcctggtgggcgacctgctcagcaccatccccctc
gtcacggggtgcatcatcgccgtcatgggcaccgagaacacacacggagagtttgaggtc
atcgacatcaaggtgcccgatctggctccccagcccgagcgctgggccctctccaaggcg
ccctcggccggcggcaaggcaaagagcgaggatacagaaatgacagactccccctcggag
ggcggcggcaagaagattgccattgtgtcgggcctgtccttttccggcaccgacgcctcg
tacgacctcgagctgaatctcctgctcgagtacttgctgggggaggccctcggcccaggg
gagcaggccggcgtctcgcagatcagcaggctcatcatcgccggcgactccatctcaatg
acagccgccaaggataccgacgacgacgacgacgaggtcaagaagagggcgcagaagaag
tacggctacgacgccagcgcgtacaaccccatcccgtcccagctttttgacgagttcctc
tccgagctgctgccttccatccctgtcaccctcctccccggtgcccaggaccctgccaac
gcgagctatccacagcagcccatccacacggccatgttccccatctcaagagcctacgca
gcagatgccgcagcggcatccgcgtcgcagcccggctggttcgacaccgtgacgaatccc
tgggaggcggaagtggaagggtggagagtactaggcacgggcgggcagaacgtcgacgac
gtgttcaagtatgttgagagcgacgaccgcttgggcatgatggaggccatgtgcagatgg
agatgctgcgctccgacagcgcccgatacgctatggagctacccgtttcaagaagacgat
ccgtttgtcctcaaatcgtgcccgcacgtctacttcgtcggctgccagcccgagtttgca
acaaaggtgattcacgggcccgacggccaaagcgtgcgactcattgccgtgccgtcgttt
tcgaagagcaaggagtttgtgttggtggatacggagacgctggaggtgagcaaagtccgg
atcacatcaaggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   JGI (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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