KEGG   Trichoderma reesei RUT C-30: M419DRAFT_92157
Entry
M419DRAFT_92157   CDS       T06031                                 
Name
(GenBank) autophagy protein Atg13
  KO
K08331  autophagy-related protein 13
Organism
trr  Trichoderma reesei RUT C-30
Pathway
trr04136  Autophagy - other
trr04138  Autophagy - yeast
Brite
KEGG Orthology (KO) [BR:trr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04138 Autophagy - yeast
    M419DRAFT_92157
   04136 Autophagy - other
    M419DRAFT_92157
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:trr04131]
    M419DRAFT_92157
   03029 Mitochondrial biogenesis [BR:trr03029]
    M419DRAFT_92157
Membrane trafficking [BR:trr04131]
 Autophagy
  Autophagosome formation proteins
   ULK complex
    M419DRAFT_92157
   Atg1 complex
    M419DRAFT_92157
Mitochondrial biogenesis [BR:trr03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-independent mechanism factors
    M419DRAFT_92157
SSDB
Motif
Pfam: ATG13
Other DBs
NCBI-ProteinID: ETR97225
JGI: TrireRUTC30_1_92157
UniProt: A0A024RYH2
Position
Unknown
AA seq 937 aa
MHQQARVPPRLASPARSPMRSNSLREGMVGSRPRAGSNLSTRESASSPTMEQPGPPAESI
KKLDQIVQNFHTKIASVVVASRMKVKPVHGANGAPRINKWVHGRNCRGSDMITTQQFQIE
TEEIDDFKEELRIWKACGSLENHPPPMIIEVYLDASTLKESQSLVIIDEDGKRWDVIEQL
TASTSSNDSDSLTTIRKPTEVILERWRVELKGITDKPVDDFGPILPTIYKKAIVFFRSLF
VATKLLPAWKFASQGAVKNSHPALIPQCRIRMSDPDRSRPDLLKNPIDGRRDAVTEYMFG
DLDVPVGRLCTSVIYRNDCTFRVDDSESLLSSRFMGVDENFFKPSLPQRHMAEVGSLRDH
RRGVSVNDVHQTYGSLSTFHGDGPMGTSPISALRAVKPPGSDTSSPPASFPHQTDPGAAV
PHSLPMSGRASAARPAVRIGEDRRRPSISFQPFKAGSLSGSPVPRQSDPESPASLTRPSL
PSLRQPGNRSSLTAGMPASLRGGPASVNATESPIAGSPRPASASRYSSSFTHRRGRLSIS
STSRAGDEEQSSSGRQSLASSTVQPGSGFLAEVGAGSYSSLQTEEDDISDFLKALDSKKT
LKSFEPTKKGESATSRTVAQLSKFQMMRESNAALTESMTSSMQLNRSSTVSSRQLANLTG
IGGTISLSTSTSPGKPVSPHTPHTPAIPSRLSENSIIDYAPTYKRVEPPERENQQSRTTG
GTQGRGTTTHDGVTAIDIPLSPRLDVYHRRSSSVAQQVRTVADDEEADLPFATHRSISLG
ANDREPPTLSTLLGRQMRLEDECSGQQEEASSPLRPATGIQTAESSDVIQRGSVSDTPPD
GFISSAQPSSPFQRRRYPGMASGRRSTPPHSSRGSFAGSTSRLGRPDDEAVGEEPLVFTL
SEMDALGRRSMEEGRGSGSVDRPSFEPRGTTRRGWAE
NT seq 2814 nt   +upstreamnt  +downstreamnt
atgcatcagcaagcccgtgtgcccccgaggctcgcctcgccggcgaggtcacccatgcgg
tccaacagcctacgagaaggtatggtgggatctcggccgcgcgcgggatcgaacctctcg
acccgggagtctgcgagctcgccaaccatggaacagcccggacccccggccgagtcaata
aagaagttggatcagattgtccagaatttccacaccaagattgcttcggtcgtcgtcgct
tcgcgtatgaaggtcaagcctgtccacggcgccaacggagcgccaagaatcaacaaatgg
gtacatggaagaaactgtcggggttctgacatgattacaacacaacagtttcagatcgaa
accgaggaaattgacgatttcaaggaagagctgaggatatggaaggcctgcggcagcctc
gagaaccaccctccgccaatgatcatcgaagtgtatttggatgcgtcgacgctcaaggaa
agccagagccttgtcatcattgacgaggacggcaagcgctgggacgtcatagagcagctc
accgcatcgacatcctccaatgacagcgactcgctcaccacgatccgaaaacccaccgag
gtgatactcgaacgatggcgggtggaactcaagggcatcaccgacaagcccgtagacgac
tttggaccgatcctgccgaccatctacaagaaggccattgtcttcttccgatccctcttc
gtcgccacaaagctactccccgcctggaagtttgccagccaaggcgccgtcaagaactct
caccctgctctgatccctcagtgccgtatccgaatgtccgacccggacaggtcacggccc
gacctgttgaagaatccgatcgatgggaggagggatgcagtcacagagtacatgtttgga
gacctcgacgtgcctgtggggaggctgtgcacatccgtgatctatcgcaatgactgcacg
ttccgcgttgacgactcagagtccctcctgagctcccgctttatgggagtagacgaaaac
ttcttcaagccatcattgccccagcgacacatggccgaggtaggctcgctgcgggaccac
cgccggggagtgagcgtgaatgacgttcaccagacatatggtagcctgtcgacattccac
ggtgatggccccatgggaacaagtcccatttctgctcttcgtgctgttaagccgcccggt
tcagacacgagctcgcctccggcatcatttcctcaccagaccgatccgggagctgcagtg
cctcattcactgcccatgtcagggcgagcgtctgcggcgagacccgcggttcggattggg
gaggaccgaagaagaccatccatatctttccagccattcaaagctggctcgctctcgggg
tctcccgttccgcggcagagcgaccctgaatcgcctgcgtcgctcaccaggcccagtttg
ccgtctcttcgacagccggggaacagatcttcgctgaccgcgggcatgccggcctccctc
cgcggcgggccagcctccgtcaacgccaccgagtcgcccatcgcaggatccccacggccc
gcctcggccagccggtacagcagcagcttcacgcaccgcagaggtcgcctgtccattagc
agcacgagccgggcgggtgacgaggagcagagcagcagcggaaggcagagcttagcttcc
tcaacagtgcagccagggtcaggattcctcgcagaggttggagcgggaagctacagctcg
cttcagactgaggaggacgacatttccgactttctaaaggcactggacagcaagaagacg
ctcaaatccttcgaaccgaccaagaagggagagtctgcgactagtaggacagtcgcccag
ttgtccaagttccagatgatgagggaatccaacgccgcgttgaccgagtccatgacttct
tccatgcagctcaaccgctcctctaccgtttcaagccggcagctggcgaatctcactggc
atcggcgggacgatatcgctatccacctctacctcgcccggaaagccagtgtcgccgcac
acgccgcacacaccggcaattccatcccgcctgagcgagaactcgattatcgattatgct
ccgacttacaagcgggtggaaccgcctgagcgggagaatcagcaatctcgaacaacagga
ggaactcaagggcggggcaccacaacccatgatggagtgaccgcgattgatatccctcta
tcccctagactggacgtctaccaccgccgatcaagctcagtcgcccagcaggttcgaact
gtggcggatgatgaagaagctgacctcccgtttgctacgcaccgaagcatcagtctcggg
gccaacgaccgggagccgccgacgctgagcacactcctcggccggcaaatgcgcttggaa
gacgagtgttccgggcagcaggaagaggcgtccagcccgcttcggccggccaccggcatt
cagactgccgagtcgtctgacgtgatacagcgaggctcggtgagcgacacacctcccgat
ggcttcatctcttcggcgcaaccgagttctcccttccagcgccggcggtatccgggcatg
gcgagcggccgccggagcactcctccgcactcctcccgaggcagtttcgctgggtcgacc
agtaggcttggccgcccagacgacgaggccgttggcgaggagccgctggtgtttacgctc
tccgagatggacgcgctgggaaggcggagcatggaagaaggtcgcggcagtggatccgtt
gaccgaccatcctttgagccacgaggcacgactcgaagaggatgggccgagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   JGI (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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