KEGG   Takifugu rubripes (torafugu): 100101241
Entry
100101241         CDS       T02386                                 
Symbol
plod1
Name
(RefSeq) procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 precursor
  KO
K00473  procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 [EC:1.14.11.4]
Organism
tru  Takifugu rubripes (torafugu)
Pathway
tru00310  Lysine degradation
tru01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:tru00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    100101241 (plod1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tru04147]
    100101241 (plod1)
Enzymes [BR:tru01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.4  procollagen-lysine 5-dioxygenase
     100101241 (plod1)
Exosome [BR:tru04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   100101241 (plod1)
SSDB
Motif
Pfam: 2OG-FeII_Oxy Anp1 2OG-FeII_Oxy_3
Other DBs
NCBI-GeneID: 100101241
NCBI-ProteinID: NP_001093074
Ensembl: ENSTRUG00000008466
UniProt: A5A6S1
Position
3:2583465..2595633
AA seq 729 aa
MCGFMYLWISVCALFILTSCEEQRIPEEKLLVVTVATKDTDGFRRFLRSAKHFNYTVKVV
GRDEKWIGGNYMGAPGGGQKVRLLKSALEEMKNQDKIILFTDSYDVVFASGPKELLKKFQ
QARHKVVFSSESLIWPDRHLEDKYPHVREGNRFLGSGGFIGYLANVREMVAEWSGEDDDS
DQLFFTRIYIDAAKRKSINITLDSKCRLFQNLLGSLDEVVLKFEDGRVRARNLLHDTLPV
IIHGNGPTKLQVNYLGNYIPNAWTFETGCTVCHEEFQPLTALQESEYPLVVIGIFIERPT
PFVSVFFERLLKLQYPKNMLKLLIFNKEAHHEQHVNSFLQEHRNLYRAVELLGPEEAMDG
VTSRNLAFDMCRQDQNCDYFFSVDIDVVLKNENALKILIEHNLPIVAPMITRTGRLWSNF
WGALSPDGYYARSEDYVDIVQRRRVGVWNVPYVSNVYLLKGGLLRSELTDFELFNSHILD
PDMAFCHNIRSKGIFMYVTNLHTFGHILSTENYQTGHLHNDLWQIFENPLDWQERYIHPN
YTHIMKDHLIETPCPDVYWFPIFTDEACDHIVEEMENFGRWSGGANTDPRIQGGYENVPT
IDIHMNQVNFEKEWHKFLLEYIAPITEKMYPGYYTKAQFDLAFVVRYKPDEQPFLRPHHD
ASTFTINIALNQVGLDYQGGGCRFLRYNCSVEAPRKGWALMHPGRLTHYHEGLPTTAGVR
YISVSFIDP
NT seq 2190 nt   +upstreamnt  +downstreamnt
atgtgcggatttatgtatttatggatttctgtctgcgcacttttcatcctgacgagctgc
gaagagcagcgaatcccggaggagaaacttctggtggtaacagtagcaaccaaagatacc
gatggcttcaggcgtttcttgaggtcggcaaaacattttaactacactgtcaaggttgtt
ggacgtgatgaaaagtggattggaggcaactatatgggagctccaggaggaggccagaaa
gtgagactcctgaaatcagctctagaggagatgaagaatcaggacaaaatcattctcttc
actgacagttacgatgtggttttcgcctcgggtcctaaagagctgttgaagaagttccag
caggccagacacaaggtggtcttctcgtccgagagccttatttggcctgacagacatttg
gaggacaaatacccccatgtcagggagggcaacaggttcctcggctcagggggtttcatt
ggttatttggctaatgtcagagagatggttgctgagtggtcgggagaggacgacgacagc
gaccagctgttcttcaccaggatttacatcgatgcggcgaaaagaaaatctataaacatc
acactggacagcaaatgcagattgttccagaaccttcttggatctcttgatgaggtggtg
ctaaaatttgaggatggaagagtacgagctagaaacttgctgcacgataccctgcctgtc
atcattcatgggaacggacccaccaagctccaggtcaactacttgggaaactatatcccc
aatgcttggacctttgagaccggatgtacagtctgtcatgaggaattccagccgctcact
gctcttcaggagagtgaatacccgctagtggtgatcggtatcttcattgagcggcccact
ccatttgtttcagtcttctttgagcgacttctaaagctccagtatcccaagaacatgctc
aagttgttgatttttaacaaggaagctcatcacgagcagcacgtcaactctttcctgcag
gaacacagaaatctttatcgagcggtcgagttgctcgggcctgaagaggcaatggatgga
gttacttcgcgcaatctagcctttgatatgtgtcgccaggaccagaactgtgactatttc
ttcagcgtggacattgatgtggtcttaaagaatgagaacgcgctcaaaattctcattgaa
cacaatcttcctattgtggcaccaatgataactcgtactggtcgattgtggagcaacttc
tggggtgccctgagtcccgacggctactacgccagatcggaggactacgtggacatagtt
caaagacgcagagtgggggtgtggaacgtcccatatgtgtccaatgtgtacctcctgaag
ggcggccttcttcgatcagagctcacagactttgagctctttaactcgcacatcttagac
cctgacatggcgttctgccacaatatccgcagcaagggaattttcatgtatgtaaccaac
ttgcacacttttggccacatcctgtcgacagaaaactaccagactgggcatcttcataat
gacctgtggcagatctttgaaaaccccctggactggcaggagcgctacattcacccgaac
tacacccatatcatgaaggaccacctcattgaaactccttgtccggatgtatattggttc
ccaattttcactgacgaagcttgtgaccacatcgttgaagaaatggaaaactttgggcgc
tggtcaggaggagccaatacggaccccagaatccaaggagggtacgagaatgttcccaca
attgatatccacatgaatcaagtcaattttgagaaggaatggcacaaattcttactggaa
tacatcgcacctataacggaaaaaatgtatcccggctactacaccaaggctcagtttgac
ttggcctttgtagtgagatataagcccgacgagcagccctttttgagacctcaccacgat
gcctctacctttacgataaacattgcactcaatcaagtgggccttgattatcagggcggt
ggatgcaggttcctacggtacaactgctccgttgaagctccccgcaaaggctgggccctt
atgcacccaggtcgcctcactcactaccatgaggggttgccaaccacagccggtgtccgc
tacatctcagtgtctttcatagatccataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (39)   

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