KEGG   Takifugu rubripes (torafugu): 101071027
Entry
101071027         CDS       T02386                                 
Symbol
hif1a
Name
(RefSeq) hypoxia-inducible factor 1-alpha
  KO
K08268  hypoxia-inducible factor 1 alpha
Organism
tru  Takifugu rubripes (torafugu)
Pathway
tru04137  Mitophagy - animal
tru04140  Autophagy - animal
tru04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:tru00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    101071027 (hif1a)
   04137 Mitophagy - animal
    101071027 (hif1a)
   04148 Efferocytosis
    101071027 (hif1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:tru03000]
    101071027 (hif1a)
Transcription factors [BR:tru03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    101071027 (hif1a)
SSDB
Motif
Pfam: PAS_3 PAS_11 HIF-1a_CTAD HIF-1 PAS PAS_9 PAS_4 HLH SKI
Other DBs
NCBI-GeneID: 101071027
NCBI-ProteinID: XP_003962523
Ensembl: ENSTRUG00000012093
Position
2:complement(8694204..8703387)
AA seq 755 aa
MDTGIAPEKKRVSSERRKEKSRDAARCRRGKESEVFYQLAQELPLPHSISSSLDKASIMR
LAISYLRMRKLLNAGEPITGEETDLDLQLNGSYLKALDGFLMVLSEDGDMIYLSENIIKC
LGLAQFDLTGHSVFDFIHPCDQEELREMLIHRTGSKKAKEPNTERSFFLRMKCTLTSRGR
TVNVKSATWKVLHCSGQVRVYENHTEPSPDEQKESAVPYLVLICDPIPHPANIEFPLDTK
TFLSRHTMDMKFTDCDERITELMGYEPEDLLNRSVYEYYHAQDSDHLAKTHHNLFAKGQV
CTGQYRMLAKRGGFVWLETQATVIYNTKNSQPQCVVCVNFVLSGIQEEKMVLSLEQTADV
KPVKEELLQEEEEEKFIIESSSPDISEPLLKEEEKNPELDVMEMLTEVTESQPVSSLYDK
LKEKPEALTLLAPAAGDTIISLDFSCPEMQLLKEVPLYNDVMLPSTSEKLVLPLSPLPPS
EPLHVAPTTPDDTKGKRCILDSSATPASSSVVDGPHDLCFCMDSDMSSDFKLDLVEKLFT
IDTEPKTPFTTQAMEDLDLEMLAPYISMDDDFQLRSLSPDEALPSGPGNPLESTSVCLTP
EVPSYPGSPFSLPDSCTASPAPPEPLSTPHLATILAKRTTQLNKEVELRTLAAQNTPRKR
KLADVKDTIEQGVLHMGQMEQGKKLKASDMGTTRTILLLPTDLATRLLGTTSEDTGSLFS
LPQLTRDDCEVNAPLQGRQFLLQGEELLRALDHVN
NT seq 2268 nt   +upstreamnt  +downstreamnt
atggacacgggaattgcaccagaaaagaaaagggtgagttcagagcggaggaaggagaag
tcgagagatgccgcgcgatgtcggcgcggcaaggagtcggaggtgttctaccagctggct
caggaactgcccctgccccacagcatcagctccagtctggacaaggcctccataatgaga
ctcgccatcagctacctgcgcatgaggaaacttctgaacgctggtgagcccataacaggg
gaggaaacggacctggacctgcagctaaatggttcctatctgaaggctctggatggcttt
ctgatggtgctatctgaagatggagacatgatctatctctctgagaacatcatcaagtgc
ctcgggctggcacagtttgatctgactggccacagcgtgtttgacttcatccatccctgc
gaccaggaggaactgagggagatgttgatccatagaacaggctccaaaaaggccaaggag
ccaaacacggaaagaagctttttccttcgcatgaaatgcaccctgacgagcagaggtcgc
accgtcaacgttaaatccgctacatggaaggtgctgcactgctcaggacaagtgcgtgtg
tatgagaaccacactgagcccagtcctgatgagcaaaaggagtcggcggtcccatacctg
gttttgatctgtgaccccatccctcaccctgccaacattgagttccctctggacaccaag
accttcctcagccgtcatacaatggacatgaagttcacagattgtgatgagaggattact
gagctcatgggttatgagccagaggacctgctgaatcgttcagtttatgagtattaccat
gctcaggactcggatcatctcgccaagactcaccacaacttgtttgcaaagggccaggtc
tgcacaggtcagtaccgaatgttggccaagagaggcggcttcgtgtggttggaaactcaa
gcaaccgtcatctataacaccaagaactcacagccacagtgtgttgtctgtgtcaacttt
gtgctcagcggcattcaggaggagaagatggtcctgtctctggagcagactgcagacgtg
aagcctgtgaaggaggagctgctgcaggaggaggaagaggaaaagttcatcatcgagagc
agctcccctgacatttctgagcctctgctgaaggaggaagagaaaaacccagagttggac
gtcatggaaatgttgactgaggtgacggaaagccagccagtgagcagcctgtacgacaag
ctgaaggagaagcccgaggccctcaccctgctggcccccgctgctggagacacaatcatt
tcgctggacttcagctgccccgagatgcagctgctgaaggaagttcctctctacaacgat
gtgatgctcccatctacgagtgaaaagctggttctgcctctgtctcctctgccgcccagc
gagcctctccatgtcgcgcccaccacccccgacgatacaaaagggaagcgctgcatcctc
gactcttctgctacgcctgccagctcctcggtggtcgatggtccacatgatctctgtttc
tgtatggactcggatatgagctcagacttcaaactggacttggtggagaagcttttcacc
attgatacggagcccaagacccccttcaccacacaggcaatggaagacttggatctggag
atgttggctccctacatctccatggatgacgacttccagctgcgcagtctctccccggat
gaggctctaccttctggaccaggaaacccgctggaaagcacctctgtctgcctgacacca
gaagtccccagctatcccggttcccccttcagcttaccagacagctgcacagcttcccca
gcaccccctgaaccactgagcacccctcaccttgctaccatacttgctaagaggaccaca
cagctgaacaaagaggtcgaactcaggacgctggcagctcagaacaccccacgcaaaaga
aaactggctgacgtgaaagacacgatcgaacagggggttctgcacatggggcaaatggag
cagggcaaaaagctgaaggcctccgacatgggaacaaccaggaccatacttctgctgccc
acagacttggccactcgtttgctgggcaccacgtcagaagacaccggttcactcttcagc
ttaccacagctcacccgcgacgactgcgaggtcaacgcccccctacagggccgtcagttc
ttgctgcagggggaggagttgctgcgagcgctggaccacgtcaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (9)   
   Pfam (9)   
All databases (33)   

Download RDF
DBGET integrated database retrieval system