KEGG   Takifugu rubripes (torafugu): 101071246
Entry
101071246         CDS       T02386                                 
Symbol
sox5
Name
(RefSeq) transcription factor SOX-5 isoform X2
  KO
K09269  transcription factor SOX5/6/13 (SOX group D)
Organism
tru  Takifugu rubripes (torafugu)
Brite
KEGG Orthology (KO) [BR:tru00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:tru03000]
    101071246 (sox5)
Transcription factors [BR:tru03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    101071246 (sox5)
SSDB
Motif
Pfam: HMG_box HMG_box_2
Other DBs
NCBI-GeneID: 101071246
NCBI-ProteinID: XP_003977577
Ensembl: ENSTRUG00000002282
Position
18:complement(8850732..8999411)
AA seq 789 aa
MLLLSRETDTYSSMLTEPELPQECNRMSSKRPASPYGGTDGEVTMATSRQRVEDEDSEGL
GGVIHLPLASYCSKVAPRSPPNRNLDSPSNMDQDGIKGGSLSPYSQHNATSPGKEEGGGG
GRACNDGGSAVGTLGTPERRKGSLADVVDTLKQRKMEELIKSEPEEAPSIERLLSKDWKD
KLLAMGSGHIGEIKGTADSLAEKERQLMGMIGQLSSLREQLLAAHEEQKKLAASQMEKQR
QQMELAKQQQDQIARQQQQLLQQQHKINLLQQQIQQVQGQLPPLMIPVFPPDQRTLAAAA
AQQGFLMPSGFNYKPGCSDPYPLQLIPTTMAAAAAAAATPGLGPLQLQQLYAAQLAAMQV
SPGSKQHGGSLPPQANLGTHSPPTNTHPQSEKGRSSPQSNKTKDSEGAQPLNLSAKPKAS
ESKSPNSPPTSPQVPAAAAGATKLGHAGSGKHSAPSTIGGPPTRMSSIDVLSSLSSSAYL
NDHEAVTKAFAEARQMKEQLKREQQVLDAKVAAVSNLGLNNGRSDKDKAALESLSQQLKQ
QAEDKFSHAMLDFTMSGDSDGSPSVSDSRIFRESRGRGTTEPHIKRPMNAFMVWAKDERR
KILQAFPDMHNSNISKILGSRWKAMTNLEKQPYYEEQARLSKQHLEKYPDYKYKPRPKRT
CLVDGKKLRISEYKAIMKSRRQEMRQYFSVGQQGQLPLSSAGMVYPGALSMAGMPSPQMP
SEHSSMSSSPEPNSNHNQNPYMTGQKGDEPQIKEEELRLDDSNGDMYDDFDYEDEEADYT
SDNDNHITQ
NT seq 2370 nt   +upstreamnt  +downstreamnt
atgttgttgttgtcgagagagacggacacttactccagcatgctcactgagcctgagcta
cctcaggagtgtaacaggatgtcttccaagcgaccagcctctccatatggggggacagat
ggagaggtaaccatggcaaccagcagacagcgagtggaggacgaggatagcgagggactg
ggcggcgtcatccacctccccctggcgtcctattgcagcaaggtggcccctcgctcgccc
cccaaccgtaacctggacagtccctctaacatggaccaggatggcattaaagggggctcc
ctgagtccttacagccagcacaacgctacctcaccaggtaaagaggaaggcggcggtggg
gggcgggcctgcaacgacggcggctcggccgtggggaccctcggcaccccggagaggcgc
aagggcagcctggcagatgtggtggacacgctgaaacaacgcaagatggaggagctgatc
aagagcgaacccgaagaggcccccagcattgagcggctcttgtcaaaggattggaaggat
aaacttttggccatgggctcagggcacattggagaaattaaaggtaccgcagacagcctg
gcggagaaagagcgccagctcatgggcatgatcggccagctgagcagcctgagggagcag
ctcctggcggcccacgaggagcagaagaagttggctgcctcgcagatggagaagcagagg
cagcagatggagctggccaagcagcagcaggaccagattgctcggcaacagcagcagctt
ctgcagcagcaacataaaatcaacctcctgcagcagcaaatccagcaggtccagggccag
ctccctccgctgatgattcccgtctttcctcccgaccagaggaccctggcggcggcggca
gcccagcagggcttcctcatgccctccggcttcaactacaaacctggctgcagtgacccc
tacccgctccagctcatccccaccacgatggccgccgccgccgccgccgcggccactccg
ggcctgggaccgctgcagctccagcagttgtatgcagctcagctcgccgccatgcaggtg
tcaccaggaagtaagcagcacggcggaagcctgcccccgcaggcgaacctgggaactcac
tccccaccgaccaacacacacccacagagcgagaaaggccgcagctccccgcagtccaac
aagaccaaggacagtgagggtgcacagccactgaacctgtcggccaagcctaaggcatcc
gagagcaagtcacccaactcccccccaacttccccacaggttcctgccgcagctgccggt
gccaccaagttgggccatgctggctctgggaagcacagcgccccctccaccatcggagga
ccaccgaccagaatgagctcaatcgatgtgctgtcatcgctgtcctcctccgcttatctg
aacgaccatgaggcggtgaccaaggccttcgccgaggcccggcaaatgaaggagcagctg
aagagagaacagcaggtcctggacgccaaggtcgccgctgtcagcaatctgggcctcaac
aatggacgctcagacaaggacaaggctgccttggagagtctgagtcaacagctgaagcag
caggccgaggacaagttcagccacgccatgctggacttcaccatgagcggggactctgat
ggctccccgagtgtctcggactccagaatattccgggagtctcggggtcgcggcaccacc
gagccgcacatcaagcggcccatgaacgccttcatggtctgggccaaggacgagaggagg
aaaatcctccaggccttccccgacatgcacaactccaacatcagcaagatcctcggttct
cgctggaaagccatgaccaacctggagaagcagccctactatgaggagcaggctcgcctc
agcaagcagcacctagaaaagtaccccgactacaagtacaagcccaggcccaaacgcacc
tgcctggtggacggcaagaagctccgcatcagcgagtacaaggccatcatgaagtcccgc
aggcaggagatgagacagtacttcagcgtggggcagcagggtcagctgcccctgtcctcc
gcaggcatggtttaccccggcgccctgtccatggcggggatgccctccccccagatgccc
tcagagcactcgagcatgtccagcagccccgagcccaactccaaccataatcagaacccc
tacatgacgggccaaaagggggacgagcctcagatcaaagaggaggagctgcggctggac
gacagcaacggcgacatgtatgacgacttcgactacgaggacgaggaagccgattacacc
agcgacaacgacaaccacatcacccaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (13)   
   RefSeq(pep) (13)   
DNA sequence (13)   
   RefSeq(nuc) (13)   
Protein domain (2)   
   Pfam (2)   
All databases (62)   

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