KEGG   Takifugu rubripes (torafugu): 101071441
Entry
101071441         CDS       T02386                                 
Symbol
polr2i
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9 isoform X1
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
tru  Takifugu rubripes (torafugu)
Pathway
tru03020  RNA polymerase
tru03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tru00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    101071441 (polr2i)
  09124 Replication and repair
   03420 Nucleotide excision repair
    101071441 (polr2i)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tru03021]
    101071441 (polr2i)
   03400 DNA repair and recombination proteins [BR:tru03400]
    101071441 (polr2i)
Transcription machinery [BR:tru03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     101071441 (polr2i)
DNA repair and recombination proteins [BR:tru03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      101071441 (polr2i)
SSDB
Motif
Pfam: RNA_POL_M_15KD TFIIS_C Ogr_Delta Zn_ribbon_recom TF_Zn_Ribbon DZR Zn_Tnp_IS1595 Lar_restr_allev zf-C4_Topoisom GpA_ATPase
Other DBs
NCBI-GeneID: 101071441
NCBI-ProteinID: XP_003968323
Ensembl: ENSTRUG00000022235
Position
11:4290689..4292304
AA seq 126 aa
MDLETGTYEPGFVGIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKIT
HEVDELTQIIADVSQDPTLPRTEDHPCPKCGHKEAVFFQSHSMKAEDAMRLYYVCTAPHC
GHRWTE
NT seq 381 nt   +upstreamnt  +downstreamnt
atggatttagaaactggaacatatgaaccaggattcgtcggtattcggttttgtcaggaa
tgtaacaacatgttatacccgaaagaagacaaggagaaccgtatcttattatacgcgtgc
agaaactgtgactaccaacaagaggcagacaacagttgcatctacgtcaacaagatcacc
catgaggttgacgagctgacccaaataattgctgacgtgtctcaggatccaacgctacca
agaacagaggatcacccatgtcccaaatgtggccacaaggaggcggtgttcttccagtct
catagtatgaaggctgaggatgcgatgagactctactacgtttgcacggccccccactgt
ggacacagatggacggagtaa

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